runloopai
diff --git a/‎README.md‎
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diff --git a/‎src/commands/benchmark-job/run.ts‎
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@@ -181,6 +181,13 @@ rli mcp start                            # Start the MCP server
 rli mcp install                          # Install Runloop MCP server configurat...
 ```
 
+### Benchmark-job Commands (alias: `bmj`)
+
+```bash
+rli benchmark-job run                    # Run a benchmark job with an agent
+rli benchmark-job status <id>            # Get benchmark job status and results
+```
+
 
 ## MCP Server (AI Integration)
 
 
@@ -0,0 +1,300 @@
+/**
+ * Run benchmark job command
+ */
+
+import chalk from "chalk";
+import { createBenchmarkJob } from "../../services/benchmarkJobService.js";
+import {
+  listBenchmarks,
+  listPublicBenchmarks,
+} from "../../services/benchmarkService.js";
+import { getClient } from "../../utils/client.js";
+import { output, outputError } from "../../utils/output.js";
+
+// Secret name prefix for benchmark job secrets
+const SECRET_PREFIX = "BMJ_";
+
+// Supported agents and their automatic environment variables (mapped to BMJ_* secrets)
+// - automaticEnvVars: env vars that will be auto-populated from secrets or environment
+// - requiresAny: if true, at least one must be set; if false, just try to auto-populate
+const SUPPORTED_AGENTS = {
+  "claude-code": {
+    automaticEnvVars: ["ANTHROPIC_API_KEY", "CLAUDE_CODE_OAUTH_TOKEN"],
+    requiresAny: true, // At least one of these is required
+  },
+  codex: {
+    automaticEnvVars: ["OPENAI_API_KEY"],
+    requiresAny: true,
+  },
+  opencode: {
+    automaticEnvVars: ["ANTHROPIC_API_KEY", "OPENAI_API_KEY", "GOOGLE_API_KEY"],
+    requiresAny: false, // Try to auto-populate, but user may configure differently
+  },
+  goose: {
+    automaticEnvVars: ["ANTHROPIC_API_KEY", "OPENAI_API_KEY", "GOOGLE_API_KEY"],
+    requiresAny: false, // Try to auto-populate, but user may configure differently
+  },
+  "gemini-cli": {
+    automaticEnvVars: ["GEMINI_API_KEY", "GOOGLE_API_KEY"],
+    requiresAny: true, // At least one of these is required
+  },
+} as const;
+
+type SupportedAgent = keyof typeof SUPPORTED_AGENTS;
+
+interface RunOptions {
+  agent: string;
+  model: string;
+  benchmark?: string;
+  scenarios?: string[];
+  jobName?: string;
+  envVars?: string[];
+  secrets?: string[];
+  timeout?: string;
+  nAttempts?: string;
+  nConcurrentTrials?: string;
+  timeoutMultiplier?: string;
+  output?: string;
+}
+
+// Parse environment variables from KEY=value format
+function parseEnvVars(envVars: string[]): Record<string, string> {
+  const result: Record<string, string> = {};
+  for (const envVar of envVars) {
+    const eqIndex = envVar.indexOf("=");
+    if (eqIndex === -1) {
+      throw new Error(
+        `Invalid environment variable format: ${envVar}. Expected KEY=value`,
+      );
+    }
+    const key = envVar.substring(0, eqIndex);
+    const value = envVar.substring(eqIndex + 1);
+    result[key] = value;
+  }
+  return result;
+}
+
+// Parse secrets from ENV_VAR=SECRET_NAME format
+function parseSecrets(secrets: string[]): Record<string, string> {
+  const result: Record<string, string> = {};
+  for (const secret of secrets) {
+    const eqIndex = secret.indexOf("=");
+    if (eqIndex === -1) {
+      throw new Error(
+        `Invalid secret format: ${secret}. Expected ENV_VAR=SECRET_NAME`,
+      );
+    }
+    const envVarName = secret.substring(0, eqIndex);
+    const secretName = secret.substring(eqIndex + 1);
+    result[envVarName] = secretName;
+  }
+  return result;
+}
+
+// Validate agent is supported
+function validateAgent(agent: string): asserts agent is SupportedAgent {
+  if (!(agent in SUPPORTED_AGENTS)) {
+    const supportedList = Object.keys(SUPPORTED_AGENTS).join(", ");
+    throw new Error(
+      `Unsupported agent: ${agent}. Supported agents: ${supportedList}`,
+    );
+  }
+}
+
+// Check if a secret exists by name
+async function secretExists(secretName: string): Promise<boolean> {
+  const client = getClient();
+  // TODO: Fetch by name when API exposed.
+  const result = await client.secrets.list({ limit: 5000 });
+  return result.secrets?.some((s) => s.name === secretName) ?? false;
+}
+
+// Create a secret
+async function createSecret(name: string, value: string): Promise<void> {
+  const client = getClient();
+  await client.secrets.create({ name, value });
+}
+
+// Ensure agent secrets exist, creating them from env vars if needed
+// Returns the secrets mapping (ENV_VAR -> BMJ_ENV_VAR)
+async function ensureAgentSecrets(
+  agent: SupportedAgent,
+): Promise<Record<string, string>> {
+  const agentConfig = SUPPORTED_AGENTS[agent];
+  const secrets: Record<string, string> = {};
+
+  for (const varName of agentConfig.automaticEnvVars) {
+    const secretName = `${SECRET_PREFIX}${varName}`;
+    const envValue = process.env[varName];
+
+    // Check if secret exists
+    const exists = await secretExists(secretName);
+
+    if (exists) {
+      console.log(chalk.dim(`Secret ${secretName} exists`));
+      secrets[varName] = secretName;
+    } else if (envValue) {
+      // Create secret from env var
+      console.log(
+        chalk.cyan(`Creating secret ${secretName} from ${varName} env var`),
+      );
+      await createSecret(secretName, envValue);
+      secrets[varName] = secretName;
+    } else {
+      // No secret and no env var - skip (will be validated later if required)
+      console.log(
+        chalk.yellow(
+          `Secret ${secretName} not found and ${varName} not set in environment`,
+        ),
+      );
+    }
+  }
+
+  return secrets;
+}
+
+// Resolve benchmark name to ID if needed
+async function resolveBenchmarkId(benchmarkIdOrName: string): Promise<string> {
+  // If it looks like an ID (starts with bm_ or similar), return as-is
+  if (
+    benchmarkIdOrName.startsWith("bm_") ||
+    benchmarkIdOrName.startsWith("bmk_")
+  ) {
+    return benchmarkIdOrName;
+  }
+
+  // Search both user benchmarks and public benchmarks
+  const [userResult, publicResult] = await Promise.all([
+    listBenchmarks({
+      limit: 100,
+      search: benchmarkIdOrName,
+    }),
+    listPublicBenchmarks({
+      limit: 100,
+      search: benchmarkIdOrName,
+    }),
+  ]);
+
+  // Combine results
+  const allBenchmarks = [...userResult.benchmarks, ...publicResult.benchmarks];
+
+  // Look for exact name match
+  const exactMatch = allBenchmarks.find((b) => b.name === benchmarkIdOrName);
+
+  if (exactMatch) {
+    return exactMatch.id;
+  }
+
+  if (allBenchmarks.length === 0) {
+    throw new Error(`No benchmark found with name: ${benchmarkIdOrName}`);
+  }
+
+  // If no exact match but we have results, suggest them
+  const suggestions = allBenchmarks
+    .slice(0, 5)
+    .map((b) => `  - ${b.name} (${b.id})`)
+    .join("\n");
+  throw new Error(
+    `No exact match for benchmark "${benchmarkIdOrName}". Did you mean:\n${suggestions}`,
+  );
+}
+
+export async function runBenchmarkJob(options: RunOptions) {
+  try {
+    // Validate agent
+    validateAgent(options.agent);
+    const agent = options.agent as SupportedAgent;
+
+    // Parse provided env vars and secrets
+    const providedEnvVars = options.envVars
+      ? parseEnvVars(options.envVars)
+      : {};
+    const providedSecrets = options.secrets
+      ? parseSecrets(options.secrets)
+      : {};
+
+    // Ensure agent secrets exist (auto-create from env vars if needed)
+    // Maps ENV_VAR -> BMJ_ENV_VAR (e.g., ANTHROPIC_API_KEY -> BMJ_ANTHROPIC_API_KEY)
+    const agentSecrets = await ensureAgentSecrets(agent);
+
+    // Validate that at least one secret is available (only if requiresAny is true)
+    const agentConfig = SUPPORTED_AGENTS[agent];
+    if (agentConfig.requiresAny) {
+      const hasAny = agentConfig.automaticEnvVars.some(
+        (varName) => agentSecrets[varName],
+      );
+      if (!hasAny) {
+        throw new Error(
+          `Agent ${agent} requires at least one of: ${agentConfig.automaticEnvVars.join(", ")}. ` +
+            `Create secrets (${agentConfig.automaticEnvVars.map((v) => `${SECRET_PREFIX}${v}`).join(", ")}) ` +
+            `or set environment variables.`,
+        );
+      }
+    }
+    // If requiresAny is false, we just use whatever secrets were auto-populated
+    // User may be configuring credentials via other means (e.g., --secrets flag)
+
+    // Combine agent secrets with user-provided secrets
+    const secrets = {
+      ...agentSecrets,
+      ...providedSecrets,
+    };
+
+    // Validate that either benchmark or scenarios is provided, but not both
+    if (!options.benchmark && !options.scenarios) {
+      throw new Error("Either --benchmark or --scenarios must be specified");
+    }
+    if (options.benchmark && options.scenarios) {
+      throw new Error("Cannot specify both --benchmark and --scenarios");
+    }
+
+    // Resolve benchmark ID if name was provided
+    let benchmarkId: string | undefined;
+    if (options.benchmark) {
+      benchmarkId = await resolveBenchmarkId(options.benchmark);
+    }
+
+    // Build orchestrator config with defaults
+    const orchestratorConfig = {
+      nConcurrentTrials: options.nConcurrentTrials
+        ? parseInt(options.nConcurrentTrials, 10)
+        : 10,
+      nAttempts: options.nAttempts ? parseInt(options.nAttempts, 10) : 1,
+      timeoutMultiplier: options.timeoutMultiplier
+        ? parseFloat(options.timeoutMultiplier)
+        : 1.0,
+      quiet: false,
+    };
+
+    // Create the benchmark job
+    const job = await createBenchmarkJob({
+      name: options.jobName,
+      benchmarkId,
+      scenarioIds: options.scenarios,
+      agentConfigs: [
+        {
+          name: agent,
+          modelName: options.model,
+          timeoutSeconds: options.timeout
+            ? parseInt(options.timeout, 10)
+            : 1800,
+          environmentVariables:
+            Object.keys(providedEnvVars).length > 0
+              ? providedEnvVars
+              : undefined,
+          secrets,
+        },
+      ],
+      orchestratorConfig,
+    });
+
+    // Output result
+    if (!options.output || options.output === "text") {
+      console.log(job.id);
+    } else {
+      output(job, { format: options.output, defaultFormat: "json" });
+    }
+  } catch (error) {
+    outputError("Failed to run benchmark job", error);
+  }
+}