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Change sort order for trio-dnm3 test file#2571

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whitwham merged 1 commit into
samtools:developfrom
daviesrob:trio-dnm3-sort-order
Jun 23, 2026
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Change sort order for trio-dnm3 test file#2571
whitwham merged 1 commit into
samtools:developfrom
daviesrob:trio-dnm3-sort-order

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The trio-dnm3.1.out file was sorted using -k4,4g, which is an extension to the POSIX specification. While widely supported, it isn't available everywhere leading to test failures on some platforms. As the ordering isn't that important for the purposes of the test, the easiest solution is to sort it by the filename in the first column instead.

The trio-dnm3.1.out file was sorted using `-k4,4g`, which is an
extension to the POSIX specification.  While widely supported,
it isn't available everywhere leading to test failures on
some platforms.  As the ordering isn't that important for the
purposes of the test, the easiest solution is to sort it by
the filename in the first column instead.
@whitwham whitwham self-assigned this Jun 23, 2026
@whitwham whitwham merged commit 7813ff9 into samtools:develop Jun 23, 2026
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2 participants