Fix for jupytext

Author: finsberg

README.md

@@ -11,7 +11,7 @@ Provide the abstract of the paper
 
 ## Getting started
 
-We provide a pre-build Docker image which can be used to run the the code in this repository. First thing you need to do is in ensure that you have [docker installed](https://docs.docker.com/get-docker/).
+We provide a pre-build Docker image which can be used to run the the code in this repository. First thing you need to do is to ensure that you have [docker installed](https://docs.docker.com/get-docker/).
 
 To start an interactive docker container you can execute the following command
 

code/demo.py

@@ -1,29 +1,15 @@
-# ---
-# jupyter:
-#   jupytext:
-#     text_representation:
-#       extension: .py
-#       format_name: light
-#       format_version: '1.5'
-#       jupytext_version: 1.15.2
-#   kernelspec:
-#     display_name: Python 3.10.6 64-bit ('3.10.6')
-#     language: python
-#     name: python3
-# ---
 # # Demo
 #
 # This notebook contains a simple demo on how to work with the code.
-import sys
-
-sys.path.insert(0, "../code")
+#
 
-# +
+import sys
 import numpy as np
 from scipy.integrate import solve_ivp
 import ap_features as apf
 
-from run_simulation import fitzhugh_nagumo
+sys.path.insert(0, "../code")
+from run_simulation import fitzhugh_nagumo  # noqa: E402
 
 # +
 a = -0.22