A list of repositories used in research in the Scientific Computing Department follows. A link to relevant publications/preprints is referenced.
- In-silico molecular enrichment and clearance of the human intracranial space {cite}
causemann2025insilico - Advection versus diffusion in brain ventricular transport {cite}
herlyng2025advection - Stretch and flow at the gliovascular interface: high-fidelity modelling of the mechanics of astrocyte endfeet {cite}
causemann2025stretch - Impact of segregation scheme on performance of a strongly coupled cardiac electromechanical solver {cite}
MYKLEBUST2025118270 - A software benchmark for cardiac elastodynamics {cite}
arostica2025117485 - Arrhythmic Mitral Valve Syndrome: Insights from Left Ventricular End-Systolic Shape Analysis {cite}
monopoli2025arrhythmic - DeepValve: an automatic detection pipeline for the mitral valve in cardiac magnetic resonance imaging {cite}
monopoli2025deepvalve
- Human brain MRI data of CSF tracer evolution over 72h for data-integrated simulations {cite}
riseth2025human - The sodium/glucose cotransporter 2 inhibitor Empagliflozin inhibits long QT 3 late sodium currents in a mutation specific manner {cite}
LUNSONGA202599 - An electrodiffusive network model with multicompartmental neurons and synaptic connections {cite}
saetra2024 - Automatic motion estimation with applications to hiPSC-CMs {cite}
10.1088/2057-1976/ad7268 - A computational study of right ventricular mechanics in a rat model of pulmonary arterial hypertension {cite}
odeigah2024computational
- Human brain solute transport quantified by glymphatic MRI-informed biophysics during sleep and sleep deprivation {cite}
vinje2023human - Medical image registration using optimal control of a linear hyperbolic transport equation with a DG discretization {cite}
zapf2023medical - ffian: Fluid Flow In Astrocyte Networks {cite}
sætra2023 - A novel density based approach for topology optimization of Stokes flow {cite}
haubner2023 - The directional flow generated by peristalsis in perivascular networks—Theoretical and numerical reduced-order descriptions {cite}
10.1063/5.0160334
- Multi-compartmental model of glymphatic clearance of solutes in brain tissue {cite}
poulain2022 - Geometrically reduced modelling of pulsatile flow in perivascular networks {cite}
daversin2022 - Nitsche method for solving Navier-Stokes with slip boundary conditions {cite}
gjerde2022 - HAZniCS - Software Components for Multiphysics Problems {cite}
budisa2022
- An electrodiffusive neuron-extracellular-glia model for exploring the genesis of slow potentials in the brain {cite}
saetra2021
- Efficient estimation of personalized biventricular mechanical function employing gradient-based optimization {cite}
https://doi.org/10.1002/cnm.2982
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