Dear,
As I can see from the paper that snapATAC2 can easily integrate with SCENICplus. But I see that in SCENICplus, the first step is to call consensus peaks then do quality control, which is very different from snapATAC2, if I am not wrong.
Could I please ask which step you were referring in the paper to best integrate snapATAC2 with SCENICplus?
Thanks
tingting
Dear,
As I can see from the paper that snapATAC2 can easily integrate with SCENICplus. But I see that in SCENICplus, the first step is to call consensus peaks then do quality control, which is very different from snapATAC2, if I am not wrong.
Could I please ask which step you were referring in the paper to best integrate snapATAC2 with SCENICplus?
Thanks
tingting