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key_added to uns for clustering #378

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Merged
Intron7 merged 2 commits into from
May 30, 2025
Merged

key_added to uns for clustering #378

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3f12b52
add key added to uns
Intron7 May 30, 2025
bd383d8
add release note
Intron7 May 30, 2025
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2 changes: 2 additions & 0 deletions docs/release-notes/0.12.7.md
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Expand Up @@ -8,6 +8,8 @@

```{rubric} Bug fixes
```
* `key_added` will now be used as the key for `.uns` for `tl.leiden` and `tl.louvain` {pr}`378` {smaller}`S Dicks`


```{rubric} Misc
```
2 changes: 2 additions & 0 deletions docs/release-notes/index.md
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Expand Up @@ -3,6 +3,8 @@
# Release notes

## Version 0.12.0
```{include} /release-notes/0.12.7.md
```
```{include} /release-notes/0.12.6.md
```
```{include} /release-notes/0.12.5.md
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8 changes: 4 additions & 4 deletions src/rapids_singlecell/tools/_clustering.py
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Expand Up @@ -181,8 +181,8 @@ def leiden(
categories=natsorted(map(str, np.unique(groups))),
)
# store information on the clustering parameters
adata.uns["leiden"] = {}
adata.uns["leiden"]["params"] = {
adata.uns[key_added] = {}
adata.uns[key_added]["params"] = {
"resolution": resolution,
"random_state": random_state,
"n_iterations": n_iterations,
Expand Down Expand Up @@ -319,8 +319,8 @@ def louvain(
values=groups.astype("U"),
categories=natsorted(map(str, np.unique(groups))),
)
adata.uns["louvain"] = {}
adata.uns["louvain"]["params"] = {
adata.uns[key_added] = {}
adata.uns[key_added]["params"] = {
"resolution": resolution,
"n_iterations": n_iterations,
"threshold": threshold,
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