api.md

API

This section documents the Application Programming Interface (API) for the spatialdata_io package.

.. module:: spatialdata_io

spatialdata-io

I/O for the spatialdata project.

Readers

Spatial technologies

.. autosummary::
    :toctree: generated

    codex
    cosmx
    curio
    dbit
    experimental.iss
    macsima
    mcmicro
    merscope
    molecular_cartography
    seqfish
    steinbock
    stereoseq
    visium
    visium_hd
    xenium

Data types

.. autosummary::
    :toctree: generated

    generic
    image
    geojson

Conversion functions

.. currentmodule:: spatialdata_io

.. autosummary::
    :toctree: generated

    experimental.from_legacy_anndata
    experimental.to_legacy_anndata

Utility functions

.. currentmodule:: spatialdata_io

.. autosummary::
    :toctree: generated

    xenium_aligned_image
    xenium_explorer_selection