spatialdata-io/src/spatialdata_io/__init__.py at a2d73828e215e615c853a94bc33ec3c3698aeb37 · scverse/spatialdata-io · GitHub

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from importlib.metadata import version

from spatialdata_io.converters.generic_to_zarr import generic_to_zarr
from spatialdata_io.readers.codex import codex
from spatialdata_io.readers.cosmx import cosmx
from spatialdata_io.readers.curio import curio
from spatialdata_io.readers.dbit import dbit
from spatialdata_io.readers.generic import generic, geojson, image
from spatialdata_io.readers.macsima import macsima
from spatialdata_io.readers.mcmicro import mcmicro
from spatialdata_io.readers.merscope import merscope
from spatialdata_io.readers.molecular_cartography import molecular_cartography
from spatialdata_io.readers.seqfish import seqfish
from spatialdata_io.readers.steinbock import steinbock
from spatialdata_io.readers.stereoseq import stereoseq
from spatialdata_io.readers.visium import visium
from spatialdata_io.readers.visium_hd import visium_hd
from spatialdata_io.readers.xenium import (
    xenium,
    xenium_aligned_image,
    xenium_explorer_selection,
)

_readers_technologies = [
    "codex",
    "cosmx",
    "curio",
    "dbit",
    "macsima",
    "mcmicro",
    "merscope",
    "seqfish",
    "steinbock",
    "stereoseq",
    "visium",
    "visium_hd",
    "xenium",
]

_readers_file_types = [
    "generic",
    "image",
    "geojson",
]

_converters = [
    "generic_to_zarr",
]


__all__ = (
    [
        "xenium_aligned_image",
        "xenium_explorer_selection",
    ]
    + _readers_technologies
    + _readers_file_types
    + _converters
)


__version__ = version("spatialdata-io")