Merge branch 'chore/sdata-access' of https://github.com/selmanozleyen/squidpy into chore/sdata-access

Author: selmanozleyen

src/squidpy/gr/_build.py

@@ -147,7 +147,7 @@ def spatial_neighbors(
         adata=adata,
         elements_to_coordinate_systems=elements_to_coordinate_systems,
         table_key=table_key,
-        spatial_key=spatial_key
+        spatial_key=spatial_key,
     )
 
     _assert_positive(n_rings, name="n_rings")
@@ -451,6 +451,7 @@ def _resolve_sdata(
         library_key = region_key
         return adata, library_key
 
+
 @njit
 def _csr_bilateral_diag_scale_helper(
     mat: csr_array | csr_matrix,

src/squidpy/gr/_utils.py

@@ -22,15 +22,13 @@
 from squidpy._docs import d
 from squidpy._utils import NDArrayA, _unique_order_preserving
 
-
 _TABLE_KEY_DOC = """    table_key
         Key in :attr:`spatialdata.SpatialData.tables` to extract.
         Only used when ``adata`` is a :class:`spatialdata.SpatialData`.
         If `None` and the object contains exactly one table, that table is
         used automatically; otherwise a :class:`ValueError` is raised."""
 
 
-
 def _resolve_table(sdata: SpatialData, table_key: str | None) -> AnnData:
     """Look up or auto-detect the table inside a :class:`~spatialdata.SpatialData`."""
     tables = sdata.tables