Functions to QC histopathology images #1036
Merged
Codecov / codecov/project
succeeded
Apr 10, 2026 in 0s
73.56% (target 1.00%)
View this Pull Request on Codecov
73.56% (target 1.00%)
Details
Codecov Report
❌ Patch coverage is 68.78505% with 167 lines in your changes missing coverage. Please review.
✅ Project coverage is 73.56%. Comparing base (8f8f736) to head (4a6e266).
Additional details and impacted files
@@ Coverage Diff @@
## main #1036 +/- ##
==========================================
- Coverage 74.05% 73.56% -0.50%
==========================================
Files 39 44 +5
Lines 6495 6929 +434
Branches 1122 1174 +52
==========================================
+ Hits 4810 5097 +287
- Misses 1230 1347 +117
- Partials 455 485 +30 | Files with missing lines | Coverage Δ | |
|---|---|---|
| src/squidpy/experimental/im/_detect_tissue.py | 67.77% <100.00%> (ø) |
|
| src/squidpy/experimental/im/_qc_metrics.py | 100.00% <100.00%> (ø) |
|
| src/squidpy/experimental/im/_make_tiles.py | 72.72% <90.90%> (-1.07%) |
⬇️ |
| src/squidpy/experimental/im/_intensity_metrics.py | 54.54% <54.54%> (ø) |
|
| src/squidpy/experimental/im/_utils.py | 61.33% <72.38%> (+23.03%) |
⬆️ |
| src/squidpy/experimental/im/_qc_image.py | 82.48% <82.48%> (ø) |
|
| src/squidpy/experimental/pl/_qc_image.py | 60.22% <60.22%> (ø) |
|
| src/squidpy/experimental/im/_sharpness_metrics.py | 29.23% <29.23%> (ø) |
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