[bot] update/containers-2025-11-27

quay.io/biocontainers/barbell/container.yaml

@@ -0,0 +1,12 @@
+url: https://biocontainers.pro/tools/barbell
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for barbell
+latest:
+  0.3.0--hc1c3326_0: 
+    sha256:ad9b13a629725e52188f31a0f1f84eeb7c8ad3b67d32c5443f52bc57da815fb7
+tags:
+  0.3.0--hc1c3326_0: 
+    sha256:ad9b13a629725e52188f31a0f1f84eeb7c8ad3b67d32c5443f52bc57da815fb7
+docker: quay.io/biocontainers/barbell
+aliases:
+  barbell: /usr/local/bin/barbell

quay.io/biocontainers/curve-curator/container.yaml

@@ -0,0 +1,25 @@
+url: https://biocontainers.pro/tools/curve-curator
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for curve-curator
+latest:
+  0.6.0--pyhdfd78af_0: 
+    sha256:a081a00c8a02b7a77a612d995da6dc5bd8fac277e8855b156b181d50d3ef6c86
+tags:
+  0.6.0--pyhdfd78af_0: 
+    sha256:a081a00c8a02b7a77a612d995da6dc5bd8fac277e8855b156b181d50d3ef6c86
+docker: quay.io/biocontainers/curve-curator
+aliases:
+  CurveCurator: /usr/local/bin/CurveCurator
+  bokeh: /usr/local/bin/bokeh
+  py.test: /usr/local/bin/py.test
+  pytest: /usr/local/bin/pytest
+  idle3.13: /usr/local/bin/idle3.13
+  pydoc3.13: /usr/local/bin/pydoc3.13
+  python3.13: /usr/local/bin/python3.13
+  python3.13-config: /usr/local/bin/python3.13-config
+  numpy-config: /usr/local/bin/numpy-config
+  tqdm: /usr/local/bin/tqdm
+  tjbench: /usr/local/bin/tjbench
+  opj_compress: /usr/local/bin/opj_compress
+  opj_decompress: /usr/local/bin/opj_decompress
+  opj_dump: /usr/local/bin/opj_dump

quay.io/biocontainers/daisyblast/container.yaml

@@ -0,0 +1,37 @@
+url: https://biocontainers.pro/tools/daisyblast
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for daisyblast
+latest:
+  0.2.0--pyhdfd78af_0: 
+    sha256:17e0cb6e9c2c5293eb2e74a14604082df007abef065a2482e51e4524fff803bf
+tags:
+  0.2.0--pyhdfd78af_0: 
+    sha256:17e0cb6e9c2c5293eb2e74a14604082df007abef065a2482e51e4524fff803bf
+docker: quay.io/biocontainers/daisyblast
+aliases:
+  daisyblast: /usr/local/bin/daisyblast
+  archive-nlmnlp: /usr/local/bin/archive-nlmnlp
+  archive-pids: /usr/local/bin/archive-pids
+  download-flatfile: /usr/local/bin/download-flatfile
+  ecollect: /usr/local/bin/ecollect
+  gbf2facds: /usr/local/bin/gbf2facds
+  gbf2tbl: /usr/local/bin/gbf2tbl
+  gff-sort: /usr/local/bin/gff-sort
+  gff2xml: /usr/local/bin/gff2xml
+  pair-at-a-time: /usr/local/bin/pair-at-a-time
+  print-missing-subranges: /usr/local/bin/print-missing-subranges
+  sort-by-length: /usr/local/bin/sort-by-length
+  xcommon.sh: /usr/local/bin/xcommon.sh
+  xfetch: /usr/local/bin/xfetch
+  xfetch.ini: /usr/local/bin/xfetch.ini
+  xfilter: /usr/local/bin/xfilter
+  xinfo: /usr/local/bin/xinfo
+  xlink: /usr/local/bin/xlink
+  xlink.ini: /usr/local/bin/xlink.ini
+  xsearch: /usr/local/bin/xsearch
+  idle3.14: /usr/local/bin/idle3.14
+  pydoc3.14: /usr/local/bin/pydoc3.14
+  python3.14: /usr/local/bin/python3.14
+  python3.14-config: /usr/local/bin/python3.14-config
+  bsmp2info: /usr/local/bin/bsmp2info
+  fsa2xml: /usr/local/bin/fsa2xml

quay.io/biocontainers/famus/container.yaml

@@ -0,0 +1,41 @@
+url: https://biocontainers.pro/tools/famus
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for famus
+latest:
+  0.1.1--py312hdfd78af_0: 
+    sha256:abe49d43af48f2cc40ab4f6187b92585a7fbf92dddf5120d47b8aaa0f0bc8000
+tags:
+  0.1.1--py312hdfd78af_0: 
+    sha256:abe49d43af48f2cc40ab4f6187b92585a7fbf92dddf5120d47b8aaa0f0bc8000
+docker: quay.io/biocontainers/famus
+aliases:
+  famus-classify: /usr/local/bin/famus-classify
+  famus-convert-sdf: /usr/local/bin/famus-convert-sdf
+  famus-defaults: /usr/local/bin/famus-defaults
+  famus-install: /usr/local/bin/famus-install
+  famus-train: /usr/local/bin/famus-train
+  gawk-5.3.1: /usr/local/bin/gawk-5.3.1
+  aria2c: /usr/local/bin/aria2c
+  seqkit: /usr/local/bin/seqkit
+  mmseqs: /usr/local/bin/mmseqs
+  gawkbug: /usr/local/bin/gawkbug
+  shmemrun: /usr/local/bin/shmemrun
+  oshCC: /usr/local/bin/oshCC
+  oshc++: /usr/local/bin/oshc++
+  oshcxx: /usr/local/bin/oshcxx
+  shmemCC: /usr/local/bin/shmemCC
+  shmemc++: /usr/local/bin/shmemc++
+  shmemcxx: /usr/local/bin/shmemcxx
+  oshcc: /usr/local/bin/oshcc
+  oshfort: /usr/local/bin/oshfort
+  oshmem_info: /usr/local/bin/oshmem_info
+  oshrun: /usr/local/bin/oshrun
+  shmemcc: /usr/local/bin/shmemcc
+  shmemfort: /usr/local/bin/shmemfort
+  aggregate_profile.pl: /usr/local/bin/aggregate_profile.pl
+  profile2mat.pl: /usr/local/bin/profile2mat.pl
+  ompi-clean: /usr/local/bin/ompi-clean
+  ompi-server: /usr/local/bin/ompi-server
+  orte-clean: /usr/local/bin/orte-clean
+  orte-info: /usr/local/bin/orte-info
+  orte-server: /usr/local/bin/orte-server

quay.io/biocontainers/gmove/container.yaml

@@ -0,0 +1,12 @@
+url: https://biocontainers.pro/tools/gmove
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for gmove
+latest:
+  1.3--h9948957_0: 
+    sha256:2b00cfc135aaa36fb4e7c1a713d74b5e714e257053b2da97e35c4541cc99c3a4
+tags:
+  1.3--h9948957_0: 
+    sha256:2b00cfc135aaa36fb4e7c1a713d74b5e714e257053b2da97e35c4541cc99c3a4
+docker: quay.io/biocontainers/gmove
+aliases:
+  gmove: /usr/local/bin/gmove

quay.io/biocontainers/hdmi/container.yaml

@@ -0,0 +1,39 @@
+url: https://biocontainers.pro/tools/hdmi
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for hdmi
+latest:
+  1.0.0--pyhdfd78af_0: 
+    sha256:583630a573e8aa537af939772fdd50d47fb6fa9112777126aa334063fe1bf846
+tags:
+  1.0.0--pyhdfd78af_0: 
+    sha256:583630a573e8aa537af939772fdd50d47fb6fa9112777126aa334063fe1bf846
+docker: quay.io/biocontainers/hdmi
+aliases:
+  HDMI: /usr/local/bin/HDMI
+  HDMI.py: /usr/local/bin/HDMI.py
+  hdmi: /usr/local/bin/hdmi
+  archive-nlmnlp: /usr/local/bin/archive-nlmnlp
+  archive-pids: /usr/local/bin/archive-pids
+  download-flatfile: /usr/local/bin/download-flatfile
+  ecollect: /usr/local/bin/ecollect
+  gbf2facds: /usr/local/bin/gbf2facds
+  gbf2tbl: /usr/local/bin/gbf2tbl
+  gff-sort: /usr/local/bin/gff-sort
+  gff2xml: /usr/local/bin/gff2xml
+  pair-at-a-time: /usr/local/bin/pair-at-a-time
+  print-missing-subranges: /usr/local/bin/print-missing-subranges
+  sort-by-length: /usr/local/bin/sort-by-length
+  xcommon.sh: /usr/local/bin/xcommon.sh
+  xfetch: /usr/local/bin/xfetch
+  xfetch.ini: /usr/local/bin/xfetch.ini
+  xfilter: /usr/local/bin/xfilter
+  xinfo: /usr/local/bin/xinfo
+  xlink: /usr/local/bin/xlink
+  xlink.ini: /usr/local/bin/xlink.ini
+  xsearch: /usr/local/bin/xsearch
+  ref-cache: /usr/local/bin/ref-cache
+  bsmp2info: /usr/local/bin/bsmp2info
+  fsa2xml: /usr/local/bin/fsa2xml
+  gbf2info: /usr/local/bin/gbf2info
+  just-top-hits: /usr/local/bin/just-top-hits
+  systematic-mutations: /usr/local/bin/systematic-mutations

quay.io/biocontainers/igdtools/container.yaml

@@ -0,0 +1,17 @@
+url: https://biocontainers.pro/tools/igdtools
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for igdtools
+latest:
+  2.6--py310h275bdba_0: 
+    sha256:37ee10a1fb2f841fb6334d4da3b22dffc41fef28b11e7a92b2c969b318fd6963
+tags:
+  2.6--py310h275bdba_0: 
+    sha256:37ee10a1fb2f841fb6334d4da3b22dffc41fef28b11e7a92b2c969b318fd6963
+docker: quay.io/biocontainers/igdtools
+aliases:
+  igdtools: /usr/local/bin/igdtools
+  2to3-3.10: /usr/local/bin/2to3-3.10
+  idle3.10: /usr/local/bin/idle3.10
+  pydoc3.10: /usr/local/bin/pydoc3.10
+  python3.10: /usr/local/bin/python3.10
+  python3.10-config: /usr/local/bin/python3.10-config

quay.io/biocontainers/kompot/container.yaml

@@ -0,0 +1,40 @@
+url: https://biocontainers.pro/tools/kompot
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for kompot
+latest:
+  0.6.0--pyhdfd78af_0: 
+    sha256:b37b831125a71daeee386938332f95d8b4ca6ca1f0f1ea152e309f70be809285
+tags:
+  0.6.0--pyhdfd78af_0: 
+    sha256:b37b831125a71daeee386938332f95d8b4ca6ca1f0f1ea152e309f70be809285
+docker: quay.io/biocontainers/kompot
+aliases:
+  crc32c: /usr/local/bin/crc32c
+  kompot: /usr/local/bin/kompot
+  mellon-test: /usr/local/bin/mellon-test
+  zarr: /usr/local/bin/zarr
+  protoc-31.1.0: /usr/local/bin/protoc-31.1.0
+  protoc-gen-upb-31.1.0: /usr/local/bin/protoc-gen-upb-31.1.0
+  protoc-gen-upbdefs-31.1.0: /usr/local/bin/protoc-gen-upbdefs-31.1.0
+  protoc-gen-upb: /usr/local/bin/protoc-gen-upb
+  protoc-gen-upbdefs: /usr/local/bin/protoc-gen-upbdefs
+  h5fuse: /usr/local/bin/h5fuse
+  igraph: /usr/local/bin/igraph
+  qconvex: /usr/local/bin/qconvex
+  qdelaunay: /usr/local/bin/qdelaunay
+  qhalf: /usr/local/bin/qhalf
+  qhull: /usr/local/bin/qhull
+  qvoronoi: /usr/local/bin/qvoronoi
+  rbox: /usr/local/bin/rbox
+  h5delete: /usr/local/bin/h5delete
+  natsort: /usr/local/bin/natsort
+  numba: /usr/local/bin/numba
+  idle3.13: /usr/local/bin/idle3.13
+  pydoc3.13: /usr/local/bin/pydoc3.13
+  python3.13: /usr/local/bin/python3.13
+  python3.13-config: /usr/local/bin/python3.13-config
+  grpc_cpp_plugin: /usr/local/bin/grpc_cpp_plugin
+  grpc_csharp_plugin: /usr/local/bin/grpc_csharp_plugin
+  grpc_node_plugin: /usr/local/bin/grpc_node_plugin
+  grpc_objective_c_plugin: /usr/local/bin/grpc_objective_c_plugin
+  grpc_php_plugin: /usr/local/bin/grpc_php_plugin

quay.io/biocontainers/lr_gapcloser/container.yaml

@@ -0,0 +1,49 @@
+url: https://biocontainers.pro/tools/lr_gapcloser
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for lr_gapcloser
+latest:
+  1.0--pl5321hdfd78af_0: 
+    sha256:58f8b2c747066be261e3366e98349be0190f8d7ac107e9ee33e639aee407c4af
+tags:
+  1.0--pl5321hdfd78af_0: 
+    sha256:58f8b2c747066be261e3366e98349be0190f8d7ac107e9ee33e639aee407c4af
+docker: quay.io/biocontainers/lr_gapcloser
+aliases:
+  LR_Gapcloser.sh: /usr/local/bin/LR_Gapcloser.sh
+  best-match-LR.pl: /usr/local/bin/best-match-LR.pl
+  block_align.pl: /usr/local/bin/block_align.pl
+  change_case_fasta.pl: /usr/local/bin/change_case_fasta.pl
+  complete_retriver.pl: /usr/local/bin/complete_retriver.pl
+  complete_substitute_limiter.pl: /usr/local/bin/complete_substitute_limiter.pl
+  complete_ultimate_elect.pl: /usr/local/bin/complete_ultimate_elect.pl
+  coverage_calculator.pl: /usr/local/bin/coverage_calculator.pl
+  coverage_filter.pl: /usr/local/bin/coverage_filter.pl
+  find_sequnce_file.pl: /usr/local/bin/find_sequnce_file.pl
+  form_sequence.pl: /usr/local/bin/form_sequence.pl
+  format_fa.pl: /usr/local/bin/format_fa.pl
+  further_partial_select.pl: /usr/local/bin/further_partial_select.pl
+  gap_bridging.pl: /usr/local/bin/gap_bridging.pl
+  gap_finder.pl: /usr/local/bin/gap_finder.pl
+  group_partial.pl: /usr/local/bin/group_partial.pl
+  info_formatter.pl: /usr/local/bin/info_formatter.pl
+  info_pacify.pl: /usr/local/bin/info_pacify.pl
+  join_LRlength.pl: /usr/local/bin/join_LRlength.pl
+  last_Drepeat.pl: /usr/local/bin/last_Drepeat.pl
+  partial_ultimate_elect.pl: /usr/local/bin/partial_ultimate_elect.pl
+  remove_wrong3.pl: /usr/local/bin/remove_wrong3.pl
+  retrieve-unique-alignment.pl: /usr/local/bin/retrieve-unique-alignment.pl
+  retriever_backfill.pl: /usr/local/bin/retriever_backfill.pl
+  same_filter.pl: /usr/local/bin/same_filter.pl
+  tag_alignment_filter.pl: /usr/local/bin/tag_alignment_filter.pl
+  tag_distance_filter_classify.pl: 
+    /usr/local/bin/tag_distance_filter_classify.pl
+  tag_generator.pl: /usr/local/bin/tag_generator.pl
+  tag_orientation_corrector.pl: /usr/local/bin/tag_orientation_corrector.pl
+  x86_64-conda-linux-gnu.cfg: /usr/local/bin/x86_64-conda-linux-gnu.cfg
+  qualfa2fq.pl: /usr/local/bin/qualfa2fq.pl
+  xa2multi.pl: /usr/local/bin/xa2multi.pl
+  sdust: /usr/local/bin/sdust
+  bwa: /usr/local/bin/bwa
+  paftools.js: /usr/local/bin/paftools.js
+  k8: /usr/local/bin/k8
+  minimap2: /usr/local/bin/minimap2

quay.io/biocontainers/pangbank-api/container.yaml

@@ -0,0 +1,26 @@
+url: https://biocontainers.pro/tools/pangbank-api
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for pangbank-api
+latest:
+  0.1.2--pyhdfd78af_0: 
+    sha256:f55ba8e5e551ad24359f5329e9dee5f281c0c0ac617477287f6e954683fd2c1d
+tags:
+  0.1.2--pyhdfd78af_0: 
+    sha256:f55ba8e5e551ad24359f5329e9dee5f281c0c0ac617477287f6e954683fd2c1d
+docker: quay.io/biocontainers/pangbank-api
+aliases:
+  email_validator: /usr/local/bin/email_validator
+  fastapi: /usr/local/bin/fastapi
+  pangbank_db: /usr/local/bin/pangbank_db
+  uvicorn: /usr/local/bin/uvicorn
+  watchfiles: /usr/local/bin/watchfiles
+  websockets: /usr/local/bin/websockets
+  dotenv: /usr/local/bin/dotenv
+  typer: /usr/local/bin/typer
+  httpx: /usr/local/bin/httpx
+  markdown-it: /usr/local/bin/markdown-it
+  idle3.13: /usr/local/bin/idle3.13
+  pydoc3.13: /usr/local/bin/pydoc3.13
+  python3.13: /usr/local/bin/python3.13
+  python3.13-config: /usr/local/bin/python3.13-config
+  pygmentize: /usr/local/bin/pygmentize

quay.io/biocontainers/polyat/container.yaml

@@ -0,0 +1,16 @@
+url: https://biocontainers.pro/tools/polyat
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for polyat
+latest:
+  0.1.2--pyhdfd78af_0: 
+    sha256:b14dc249ab0c24c763b5268de71dd265f2a57e6e9b95268201bfc6663445e800
+tags:
+  0.1.2--pyhdfd78af_0: 
+    sha256:b14dc249ab0c24c763b5268de71dd265f2a57e6e9b95268201bfc6663445e800
+docker: quay.io/biocontainers/polyat
+aliases:
+  polyat: /usr/local/bin/polyat
+  idle3.14: /usr/local/bin/idle3.14
+  pydoc3.14: /usr/local/bin/pydoc3.14
+  python3.14: /usr/local/bin/python3.14
+  python3.14-config: /usr/local/bin/python3.14-config

quay.io/biocontainers/sassy/container.yaml

@@ -0,0 +1,12 @@
+url: https://biocontainers.pro/tools/sassy
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for sassy
+latest:
+  0.1.8--h4349ce8_0: 
+    sha256:fc0d405bac26d99f5256ca822af4e085285fa68d8b2e873fd6562058d865aeab
+tags:
+  0.1.8--h4349ce8_0: 
+    sha256:fc0d405bac26d99f5256ca822af4e085285fa68d8b2e873fd6562058d865aeab
+docker: quay.io/biocontainers/sassy
+aliases:
+  sassy: /usr/local/bin/sassy

quay.io/biocontainers/savont/container.yaml

@@ -0,0 +1,12 @@
+url: https://biocontainers.pro/tools/savont
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for savont
+latest:
+  0.1.0--ha6fb395_0: 
+    sha256:ed450e9088ca08e176f238e97befa900b313693de8108c95865f7026ccd70ba8
+tags:
+  0.1.0--ha6fb395_0: 
+    sha256:ed450e9088ca08e176f238e97befa900b313693de8108c95865f7026ccd70ba8
+docker: quay.io/biocontainers/savont
+aliases:
+  savont: /usr/local/bin/savont

quay.io/biocontainers/tagdust2/container.yaml

@@ -0,0 +1,16 @@
+url: https://biocontainers.pro/tools/tagdust2
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for tagdust2
+latest:
+  2.33.1--h503566f_0: 
+    sha256:ec917d64096166ef79c397ffea1ace92c481db0a64808aef5553d59eebc75f46
+tags:
+  2.33.1--h503566f_0: 
+    sha256:ec917d64096166ef79c397ffea1ace92c481db0a64808aef5553d59eebc75f46
+docker: quay.io/biocontainers/tagdust2
+aliases:
+  evalres: /usr/local/bin/evalres
+  merge: /usr/local/bin/merge
+  rename_qiime: /usr/local/bin/rename_qiime
+  simreads: /usr/local/bin/simreads
+  tagdust: /usr/local/bin/tagdust

quay.io/biocontainers/taxoniumtools/container.yaml

@@ -0,0 +1,31 @@
+url: https://biocontainers.pro/tools/taxoniumtools
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for taxoniumtools
+latest:
+  2.1.17--pyhdfd78af_0: 
+    sha256:12b17365885e385707f487c4a87c36f59e3c3ceb2393d477006dc34a624c52d7
+tags:
+  2.1.17--pyhdfd78af_0: 
+    sha256:12b17365885e385707f487c4a87c36f59e3c3ceb2393d477006dc34a624c52d7
+docker: quay.io/biocontainers/taxoniumtools
+aliases:
+  inv: /usr/local/bin/inv
+  invoke: /usr/local/bin/invoke
+  newick_to_taxonium: /usr/local/bin/newick_to_taxonium
+  usher_to_taxonium: /usr/local/bin/usher_to_taxonium
+  view_taxonium: /usr/local/bin/view_taxonium
+  wsdump: /usr/local/bin/wsdump
+  pyrsa-decrypt: /usr/local/bin/pyrsa-decrypt
+  pyrsa-encrypt: /usr/local/bin/pyrsa-encrypt
+  pyrsa-keygen: /usr/local/bin/pyrsa-keygen
+  pyrsa-priv2pub: /usr/local/bin/pyrsa-priv2pub
+  pyrsa-sign: /usr/local/bin/pyrsa-sign
+  pyrsa-verify: /usr/local/bin/pyrsa-verify
+  numpy-config: /usr/local/bin/numpy-config
+  2to3-3.11: /usr/local/bin/2to3-3.11
+  idle3.11: /usr/local/bin/idle3.11
+  pydoc3.11: /usr/local/bin/pydoc3.11
+  python3.11: /usr/local/bin/python3.11
+  python3.11-config: /usr/local/bin/python3.11-config
+  protoc: /usr/local/bin/protoc
+  normalizer: /usr/local/bin/normalizer