[bot] update/containers-2026-01-15

quay.io/biocontainers/bioconductor-anndatar/container.yaml

@@ -0,0 +1,15 @@
+url: https://biocontainers.pro/tools/bioconductor-anndatar
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for 
+  bioconductor-anndatar
+latest:
+  1.0.0--r45hdfd78af_0: 
+    sha256:492593d94c56ea7583f6a9d3ab4369288b61e839af4237945d27255f63d8bbe0
+tags:
+  1.0.0--r45hdfd78af_0: 
+    sha256:492593d94c56ea7583f6a9d3ab4369288b61e839af4237945d27255f63d8bbe0
+docker: quay.io/biocontainers/bioconductor-anndatar
+aliases:
+  x86_64-conda-linux-gnu.cfg: /usr/local/bin/x86_64-conda-linux-gnu.cfg
+  hb-info: /usr/local/bin/hb-info
+  tjbench: /usr/local/bin/tjbench

quay.io/biocontainers/is6110/container.yaml

@@ -0,0 +1,38 @@
+url: https://biocontainers.pro/tools/is6110
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for is6110
+latest:
+  0.4.0--pyh7e72e81_0: 
+    sha256:9e5c697ca657bf7d86f3367e76dfde9e76e4092cd8478503aa31a0790ccf083c
+tags:
+  0.4.0--pyh7e72e81_0: 
+    sha256:9e5c697ca657bf7d86f3367e76dfde9e76e4092cd8478503aa31a0790ccf083c
+docker: quay.io/biocontainers/is6110
+aliases:
+  extract-clipped-reads: /usr/local/bin/extract-clipped-reads
+  is6110: /usr/local/bin/is6110
+  ref-cache: /usr/local/bin/ref-cache
+  annot-tsv: /usr/local/bin/annot-tsv
+  qualfa2fq.pl: /usr/local/bin/qualfa2fq.pl
+  xa2multi.pl: /usr/local/bin/xa2multi.pl
+  bwa: /usr/local/bin/bwa
+  idle3.13: /usr/local/bin/idle3.13
+  pydoc3.13: /usr/local/bin/pydoc3.13
+  python3.13: /usr/local/bin/python3.13
+  python3.13-config: /usr/local/bin/python3.13-config
+  fasta-sanitize.pl: /usr/local/bin/fasta-sanitize.pl
+  plot-ampliconstats: /usr/local/bin/plot-ampliconstats
+  tqdm: /usr/local/bin/tqdm
+  ace2sam: /usr/local/bin/ace2sam
+  blast2sam.pl: /usr/local/bin/blast2sam.pl
+  bowtie2sam.pl: /usr/local/bin/bowtie2sam.pl
+  export2sam.pl: /usr/local/bin/export2sam.pl
+  interpolate_sam.pl: /usr/local/bin/interpolate_sam.pl
+  maq2sam-long: /usr/local/bin/maq2sam-long
+  maq2sam-short: /usr/local/bin/maq2sam-short
+  md5fa: /usr/local/bin/md5fa
+  md5sum-lite: /usr/local/bin/md5sum-lite
+  plot-bamstats: /usr/local/bin/plot-bamstats
+  psl2sam.pl: /usr/local/bin/psl2sam.pl
+  sam2vcf.pl: /usr/local/bin/sam2vcf.pl
+  samtools.pl: /usr/local/bin/samtools.pl

quay.io/biocontainers/local-cd-search/container.yaml

@@ -0,0 +1,37 @@
+url: https://biocontainers.pro/tools/local-cd-search
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for local-cd-search
+latest:
+  0.3.0--pyhdfd78af_0: 
+    sha256:abf22216ebbdbe87e51663b12768b5ea57668f111f7c4cac5b066fa46c71b0ad
+tags:
+  0.3.0--pyhdfd78af_0: 
+    sha256:abf22216ebbdbe87e51663b12768b5ea57668f111f7c4cac5b066fa46c71b0ad
+docker: quay.io/biocontainers/local-cd-search
+aliases:
+  local-cd-search: /usr/local/bin/local-cd-search
+  archive-nlmnlp: /usr/local/bin/archive-nlmnlp
+  archive-pids: /usr/local/bin/archive-pids
+  download-flatfile: /usr/local/bin/download-flatfile
+  ecollect: /usr/local/bin/ecollect
+  gbf2facds: /usr/local/bin/gbf2facds
+  gbf2tbl: /usr/local/bin/gbf2tbl
+  gff-sort: /usr/local/bin/gff-sort
+  gff2xml: /usr/local/bin/gff2xml
+  pair-at-a-time: /usr/local/bin/pair-at-a-time
+  print-missing-subranges: /usr/local/bin/print-missing-subranges
+  sort-by-length: /usr/local/bin/sort-by-length
+  xcommon.sh: /usr/local/bin/xcommon.sh
+  xfetch: /usr/local/bin/xfetch
+  xfetch.ini: /usr/local/bin/xfetch.ini
+  xfilter: /usr/local/bin/xfilter
+  xinfo: /usr/local/bin/xinfo
+  xlink: /usr/local/bin/xlink
+  xlink.ini: /usr/local/bin/xlink.ini
+  xsearch: /usr/local/bin/xsearch
+  idle3.14: /usr/local/bin/idle3.14
+  pydoc3.14: /usr/local/bin/pydoc3.14
+  python3.14: /usr/local/bin/python3.14
+  python3.14-config: /usr/local/bin/python3.14-config
+  rich-click: /usr/local/bin/rich-click
+  bsmp2info: /usr/local/bin/bsmp2info

quay.io/biocontainers/maxalign-rs/container.yaml

@@ -0,0 +1,12 @@
+url: https://biocontainers.pro/tools/maxalign-rs
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for maxalign-rs
+latest:
+  0.1.0--h4349ce8_0: 
+    sha256:7a081d2b5519cfa4a316fd24c9a624a3e7d14ff62d9e74e1cb1a7864a75bcc0d
+tags:
+  0.1.0--h4349ce8_0: 
+    sha256:7a081d2b5519cfa4a316fd24c9a624a3e7d14ff62d9e74e1cb1a7864a75bcc0d
+docker: quay.io/biocontainers/maxalign-rs
+aliases:
+  maxalign-rs: /usr/local/bin/maxalign-rs

quay.io/biocontainers/rhinotype/container.yaml

@@ -0,0 +1,37 @@
+url: https://biocontainers.pro/tools/rhinotype
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for rhinotype
+latest:
+  2.0.0--pyhdfd78af_0: 
+    sha256:dab6dffa9b2132648c4cb62686a798fef9aa772d1fe9bfcbabca39c52223537c
+tags:
+  2.0.0--pyhdfd78af_0: 
+    sha256:dab6dffa9b2132648c4cb62686a798fef9aa772d1fe9bfcbabca39c52223537c
+docker: quay.io/biocontainers/rhinotype
+aliases:
+  rhinotype: /usr/local/bin/rhinotype
+  idle3.14: /usr/local/bin/idle3.14
+  pydoc3.14: /usr/local/bin/pydoc3.14
+  python3.14: /usr/local/bin/python3.14
+  python3.14-config: /usr/local/bin/python3.14-config
+  gawk-5.3.1: /usr/local/bin/gawk-5.3.1
+  gawkbug: /usr/local/bin/gawkbug
+  mafft-sparsecore.rb: /usr/local/bin/mafft-sparsecore.rb
+  einsi: /usr/local/bin/einsi
+  fftns: /usr/local/bin/fftns
+  fftnsi: /usr/local/bin/fftnsi
+  ginsi: /usr/local/bin/ginsi
+  linsi: /usr/local/bin/linsi
+  mafft-distance: /usr/local/bin/mafft-distance
+  mafft-einsi: /usr/local/bin/mafft-einsi
+  mafft-fftns: /usr/local/bin/mafft-fftns
+  mafft-fftnsi: /usr/local/bin/mafft-fftnsi
+  mafft-ginsi: /usr/local/bin/mafft-ginsi
+  mafft-homologs.rb: /usr/local/bin/mafft-homologs.rb
+  mafft-linsi: /usr/local/bin/mafft-linsi
+  mafft-nwns: /usr/local/bin/mafft-nwns
+  mafft-nwnsi: /usr/local/bin/mafft-nwnsi
+  mafft-profile: /usr/local/bin/mafft-profile
+  mafft-qinsi: /usr/local/bin/mafft-qinsi
+  mafft-xinsi: /usr/local/bin/mafft-xinsi
+  nwns: /usr/local/bin/nwns

quay.io/biocontainers/rs3/container.yaml

@@ -0,0 +1,37 @@
+url: https://biocontainers.pro/tools/rs3
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for rs3
+latest:
+  0.0.16--pyhdfd78af_0: 
+    sha256:989ce7696bb4bd6f77dfed5e07a26389fef39f1671422dc981d7db133459dd0a
+tags:
+  0.0.16--pyhdfd78af_0: 
+    sha256:989ce7696bb4bd6f77dfed5e07a26389fef39f1671422dc981d7db133459dd0a
+docker: quay.io/biocontainers/rs3
+aliases:
+  seqfold: /usr/local/bin/seqfold
+  h2benchmark: /usr/local/bin/h2benchmark
+  protoc-31.1.0: /usr/local/bin/protoc-31.1.0
+  protoc-gen-upb-31.1.0: /usr/local/bin/protoc-gen-upb-31.1.0
+  protoc-gen-upbdefs-31.1.0: /usr/local/bin/protoc-gen-upbdefs-31.1.0
+  checksum-profile: /usr/local/bin/checksum-profile
+  elastishadow: /usr/local/bin/elastishadow
+  protoc-gen-upb: /usr/local/bin/protoc-gen-upb
+  protoc-gen-upbdefs: /usr/local/bin/protoc-gen-upbdefs
+  elastipubsub5: /usr/local/bin/elastipubsub5
+  mqtt5_app: /usr/local/bin/mqtt5_app
+  mqtt5_canary: /usr/local/bin/mqtt5_canary
+  mqtt5canary: /usr/local/bin/mqtt5canary
+  elasticurl: /usr/local/bin/elasticurl
+  elasticurl_cpp: /usr/local/bin/elasticurl_cpp
+  elastipubsub: /usr/local/bin/elastipubsub
+  csv-import: /usr/local/bin/csv-import
+  orc-memory: /usr/local/bin/orc-memory
+  orc-scan: /usr/local/bin/orc-scan
+  timezone-dump: /usr/local/bin/timezone-dump
+  orc-contents: /usr/local/bin/orc-contents
+  orc-metadata: /usr/local/bin/orc-metadata
+  orc-statistics: /usr/local/bin/orc-statistics
+  gflags_completions.sh: /usr/local/bin/gflags_completions.sh
+  grpc_cpp_plugin: /usr/local/bin/grpc_cpp_plugin
+  grpc_csharp_plugin: /usr/local/bin/grpc_csharp_plugin

quay.io/biocontainers/themis/container.yaml

@@ -0,0 +1,58 @@
+url: https://biocontainers.pro/tools/themis
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for themis
+latest:
+  0.1.0--py314h0cb7dc8_0: 
+    sha256:674ee540661f79dfd1da035581882cd1f00fc1380684a3c2081dea57e65a7da4
+tags:
+  0.1.0--py314h0cb7dc8_0: 
+    sha256:674ee540661f79dfd1da035581882cd1f00fc1380684a3c2081dea57e65a7da4
+docker: quay.io/biocontainers/themis
+aliases:
+  cmp: /usr/local/bin/cmp
+  diff: /usr/local/bin/diff
+  diff3: /usr/local/bin/diff3
+  find: /usr/local/bin/find
+  ganon: /usr/local/bin/ganon
+  ganon-build: /usr/local/bin/ganon-build
+  ganon-classify: /usr/local/bin/ganon-classify
+  ganon-get-seq-info.sh: /usr/local/bin/ganon-get-seq-info.sh
+  ganon-report: /usr/local/bin/ganon-report
+  genome_updater.sh: /usr/local/bin/genome_updater.sh
+  ggcat: /usr/local/bin/ggcat
+  locate: /usr/local/bin/locate
+  raptor: /usr/local/bin/raptor
+  raptor_avx2: /usr/local/bin/raptor_avx2
+  raptor_avx512: /usr/local/bin/raptor_avx512
+  raptor_none: /usr/local/bin/raptor_none
+  raptor_sse2: /usr/local/bin/raptor_sse2
+  raptor_sse4.2: /usr/local/bin/raptor_sse4.2
+  sdiff: /usr/local/bin/sdiff
+  themis: /usr/local/bin/themis
+  updatedb: /usr/local/bin/updatedb
+  xargs: /usr/local/bin/xargs
+  bc: /usr/local/bin/bc
+  dc: /usr/local/bin/dc
+  egrep: /usr/local/bin/egrep
+  fgrep: /usr/local/bin/fgrep
+  grep: /usr/local/bin/grep
+  fastp: /usr/local/bin/fastp
+  idle3.14: /usr/local/bin/idle3.14
+  pydoc3.14: /usr/local/bin/pydoc3.14
+  python3.14: /usr/local/bin/python3.14
+  python3.14-config: /usr/local/bin/python3.14-config
+  gawk-5.3.1: /usr/local/bin/gawk-5.3.1
+  tar: /usr/local/bin/tar
+  gawkbug: /usr/local/bin/gawkbug
+  basenc: /usr/local/bin/basenc
+  b2sum: /usr/local/bin/b2sum
+  ls: /usr/local/bin/ls
+  base32: /usr/local/bin/base32
+  base64: /usr/local/bin/base64
+  basename: /usr/local/bin/basename
+  cat: /usr/local/bin/cat
+  chcon: /usr/local/bin/chcon
+  chgrp: /usr/local/bin/chgrp
+  chmod: /usr/local/bin/chmod
+  chown: /usr/local/bin/chown
+  chroot: /usr/local/bin/chroot