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docs: modified readme and other pages with DD links instead of arXiv
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README.md

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<img src="https://raw.githubusercontent.com/aritraroy24/ComProScanner/refs/heads/main/assets/comproscanner_logo.png" alt="ComProScanner Logo" width="500"/>
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</p>
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[![Python Version](https://img.shields.io/badge/python-3.12%20%7C%203.13-blue.svg?logo=python&logoColor=white)](https://www.python.org/downloads/) [![License: MIT](https://custom-icon-badges.demolab.com/badge/license-MIT-yellow.svg?logo=law&logoColor=white)](https://opensource.org/licenses/MIT) [![PyPI](https://img.shields.io/pypi/v/comproscanner?logo=pypi&logoColor=white)](https://pypi.org/project/comproscanner/) [![Documentation](https://custom-icon-badges.demolab.com/badge/docs-latest-brightgreen.svg?logo=materialformkdocs&logoColor=white)](https://slimeslab.github.io/ComProScanner/) [![Coverage](https://img.shields.io/codecov/c/github/aritraroy24/ComProScanner?logo=codecov&logoColor=white&label=coverage&color=e62277)](https://codecov.io/gh/aritraroy24/ComProScanner) [![PyPI - Downloads](https://custom-icon-badges.demolab.com/pypi/dm/comproscanner?logo=download&logoColor=white&color=purple)](https://pypistats.org/packages/comproscanner) [![Ask DeepWiki](https://custom-icon-badges.demolab.com/badge/Ask%20DeepWiki-brightgreen.svg?logo=deepwikidevin&logoColor=white&labelColor=grey&color=5ab998)](https://deepwiki.com/slimeslab/ComProScanner) [![arXiv Preprint](https://custom-icon-badges.demolab.com/badge/arXiv-2510.20362-brightgreen.svg?logo=arxiv&logoColor=white&color=b22929)](https://arxiv.org/abs/2510.20362)
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[![Python Version](https://img.shields.io/badge/python-3.12%20%7C%203.13-blue.svg?logo=python&logoColor=white)](https://www.python.org/downloads/) [![License: MIT](https://custom-icon-badges.demolab.com/badge/license-MIT-yellow.svg?logo=law&logoColor=white)](https://opensource.org/licenses/MIT) [![PyPI](https://img.shields.io/pypi/v/comproscanner?logo=pypi&logoColor=white)](https://pypi.org/project/comproscanner/) [![Documentation](https://custom-icon-badges.demolab.com/badge/docs-latest-brightgreen.svg?logo=materialformkdocs&logoColor=white)](https://slimeslab.github.io/ComProScanner/) [![Coverage](https://img.shields.io/codecov/c/github/aritraroy24/ComProScanner?logo=codecov&logoColor=white&label=coverage&color=e62277)](https://codecov.io/gh/aritraroy24/ComProScanner) [![PyPI - Downloads](https://custom-icon-badges.demolab.com/pypi/dm/comproscanner?logo=download&logoColor=white&color=purple)](https://pypistats.org/packages/comproscanner) [![Ask DeepWiki](https://custom-icon-badges.demolab.com/badge/Ask%20DeepWiki-brightgreen.svg?logo=deepwikidevin&logoColor=white&labelColor=grey&color=5ab998)](https://deepwiki.com/slimeslab/ComProScanner) [![Digital Discovery](https://custom-icon-badges.demolab.com/badge/Digital_Discovery-10.1039/D5DD00521C-brightgreen.svg?logo=rsc&logoColor=white&color=c8c300)](https://doi.org/10.1039/D5DD00521C)
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# ComProScanner
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docs/index.md

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## Paper
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Read the details of ComProScanner in the following preprint: [arXiv:2510.20362](https://arxiv.org/abs/2510.20362)
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Read the details of ComProScanner in the following Digital Discovery paper: [10.1039/D5DD00521C](https://doi.org/10.1039/D5DD00521C)
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## Citation
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If you use ComProScanner in your research, please cite:
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```bibtex
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@misc{roy2025comproscannermultiagentbasedframework,
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title={ComProScanner: A multi-agent based framework for composition-property structured data extraction from scientific literature},
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author={Aritra Roy and Enrico Grisan and John Buckeridge and Chiara Gattinoni},
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year={2025},
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eprint={2510.20362},
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archivePrefix={arXiv},
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primaryClass={physics.comp-ph},
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url={https://arxiv.org/abs/2510.20362},
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@Article{roy2026comproscannermultiagentbasedframework,
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author ="Roy, Aritra and Grisan, Enrico and Buckeridge, John and Gattinoni, Chiara",
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title ="ComProScanner: a multi-agent based framework for composition-property structured data extraction from scientific literature",
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journal ="Digital Discovery",
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year ="2026",
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pages ="Accepted",
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publisher ="RSC",
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doi ="10.1039/D5DD00521C",
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url ="https://doi.org/10.1039/D5DD00521C"
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}
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```
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docs/usage/evaluation/overview.md

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- **Classification Metrics**: Standard Precision/Recall/F1 metrics for detailed performance analysis
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- **Normalized Classification Metrics**: Classification metrics normalized to ensure an equitable comparison between articles with significant disparities in the quantity of extractable information.
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To read more about the evaluation metrics, please refer the journal article [here](https://arxiv.org/abs/2510.20362).
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To read more about the evaluation metrics, please refer the journal article [here](https://doi.org/10.1039/D5DD00521C).
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## Quick Start
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