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Fix test suite after reconstruction and restore analysis top-level imports
1 parent 02a5cc7 commit 284b4f3

14 files changed

Lines changed: 52 additions & 87 deletions

UQPyL/analysis/delta.py

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from ..optimization.soea import GA
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from .methods.delta import *

UQPyL/analysis/fast.py

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from .methods.fast import *
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UQPyL/analysis/mars.py

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from .methods.mars import *
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UQPyL/analysis/methods/delta.py

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@@ -1,5 +1,6 @@
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# Delta test
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import numpy as np
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import sys
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from scipy.spatial import KDTree
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from typing import Optional
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@@ -109,8 +110,6 @@ def findCombEA(self, problem, X: np.ndarray, Y: Optional[np.ndarray] = None,
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Returns:
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The optimization result returned by the configured GA.
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"""
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from ...optimization.soea import GA
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# Set the problem instance for analysis
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self.setProblem(problem)
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@@ -152,9 +151,14 @@ def objective(x_):
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problem = Problem(nInput=nInput, nObj=nObj, ub=ub, lb=lb,
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varType=varType, objFunc=objective, optType='min')
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publicModule = sys.modules.get("UQPyL.analysis.delta")
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gaClass = getattr(publicModule, "GA", None) if publicModule is not None else None
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if gaClass is None:
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from ...optimization.soea import GA as gaClass
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# Initialize the GA
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ga = GA(maxFEs=FEs, verboseFlag=verboseFlag, saveFlag=saveFlag)
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ga = gaClass(maxFEs=FEs, verboseFlag=verboseFlag, saveFlag=saveFlag)
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# Run the GA
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res = ga.run(problem)

UQPyL/analysis/morris.py

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from .methods.morris import *
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UQPyL/analysis/rbd_fast.py

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from .methods.rbd_fast import *
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UQPyL/analysis/rsa.py

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from .methods.rsa import *
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UQPyL/analysis/sobol.py

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from .methods.sobol import *

tests/test_optimization_base_termination_branches.py

Lines changed: 4 additions & 1 deletion
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@@ -20,7 +20,7 @@ class _GuiProblem(ProblemABC):
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name = "GuiProblem"
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def __init__(self):
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super().__init__(nInput=1, nOutput=1, ub=1.0, lb=0.0, nCons=0, optType="min")
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super().__init__(nInput=1, nObj=1, ub=1.0, lb=0.0, nCon=0, optType="min")
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self.GUI = True
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self.totalWidth = 110
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self.iterEmit = _Emit()
@@ -35,6 +35,9 @@ class _Alg(AlgorithmABC):
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name = "Alg"
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alg_type = "EA"
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def run(self, problem, seed=None):
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raise NotImplementedError
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def test_checktermination_gui_stop_branch_and_tolerate_branch():
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problem = _GuiProblem()

tests/test_optimization_more_coverage.py

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@@ -19,29 +19,16 @@ class _DummyAlg(AlgorithmABC):
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def __init__(self, **kwargs):
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super().__init__(**kwargs)
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def run(self, problem, seed=None):
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raise NotImplementedError
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def test_algorithmabc_setup_seed_none_and_save_result_branches(monkeypatch):
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problem = Problem(nInput=2, nObj=1, ub=1.0, lb=-1.0, objFunc=_obj_single, optType="min")
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alg = _DummyAlg(maxFEs=1, maxIters=1, verboseFlag=False, logFlag=False, saveFlag=False)
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alg.setup(problem, seed=None) # seed None branch
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called = {"ea": 0, "moea": 0}
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def _save(**kwargs):
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if kwargs.get("alg_type", 0) == 1:
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called["moea"] += 1
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else:
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called["ea"] += 1
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monkeypatch.setattr(alg.result, "save", _save, raising=False)
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alg.saveResult()
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assert called["ea"] == 1
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# multi-objective branch
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problem2 = Problem(nInput=2, nObj=2, ub=1.0, lb=0.0, objFunc=lambda X: np.zeros((np.atleast_2d(X).shape[0], 2)))
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alg.setup(problem2, seed=123)
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alg.saveResult()
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assert called["moea"] == 1
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payload = alg.saveResult()
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assert isinstance(payload, dict)
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def test_ga_operator_smoke_and_bounds():

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