concat precommand

johanneskoester · johanneskoester · commit 1d606e50a4aa · 2023-10-14T23:52:49.000+02:00
diff --git a/snakemake_interface_executor_plugins/executors/real.py b/snakemake_interface_executor_plugins/executors/real.py
@@ -146,6 +146,8 @@ def format_job_exec(self, job: JobExecutorInterface) -> str:
         precommand = self.workflow.spawned_job_args_factory.precommand(
             auto_deploy_default_storage_provider=self.common_settings.auto_deploy_default_storage_provider
         )
+        if precommand:
+            precommand += " &&"
 
         args = join_cli_args(
             [

Original file line number	Diff line number	Diff line change
`@@ -146,6 +146,8 @@ def format_job_exec(self, job: JobExecutorInterface) -> str:`
`146`	`146`	`precommand = self.workflow.spawned_job_args_factory.precommand(`
`147`	`147`	`auto_deploy_default_storage_provider=self.common_settings.auto_deploy_default_storage_provider`
`148`	`148`	`)`
	`149`	`+ if precommand:`
	`150`	`+ precommand += " &&"`
`149`	`151`
`150`	`152`	`args = join_cli_args(`
`151`	`153`	`[`