Disabled foldseek interface

Author: rachelse

backend/config.go

@@ -96,7 +96,7 @@ var defaultFileContent = []byte(`{
         */
         // path to foldseek binary
         "foldseek"     : "~foldseek",
-		"foldseekinterface" : "~foldseek-interface",
+		// "foldseekinterface" : "~foldseek-interface",
         "foldmason"    : "~foldmason",
 		"folddisco"    : "~folddisco",
 		"foldcomp"     : "~foldcomp",
@@ -197,17 +197,17 @@ type ConfigColabFoldPaths struct {
 }
 
 type ConfigPaths struct {
-	Databases         string                `json:"databases"`
-	Results           string                `json:"results"`
-	Temporary         string                `json:"temporary"`
-	Mmseqs            string                `json:"mmseqs"`
-	Foldseek          string                `json:"foldseek"`
-	FoldseekInterface string                `json:"foldseekinterface"`
-	FoldMason         string                `json:"foldmason"`
-	FoldDisco         string                `json:"folddisco"`
-	FoldComp          string                `json:"foldcomp"`
-	Pdb100            string                `json:"pdb100"`
-	ColabFold         *ConfigColabFoldPaths `json:"colabfold"`
+	Databases string `json:"databases"`
+	Results   string `json:"results"`
+	Temporary string `json:"temporary"`
+	Mmseqs    string `json:"mmseqs"`
+	Foldseek  string `json:"foldseek"`
+	// FoldseekInterface string                `json:"foldseekinterface"`
+	FoldMason string                `json:"foldmason"`
+	FoldDisco string                `json:"folddisco"`
+	FoldComp  string                `json:"foldcomp"`
+	Pdb100    string                `json:"pdb100"`
+	ColabFold *ConfigColabFoldPaths `json:"colabfold"`
 }
 
 type ConfigRedis struct {
@@ -341,7 +341,7 @@ func ReadConfig(r io.Reader, relativeTo string) (ConfigRoot, error) {
 		paths = append(
 			paths,
 			&config.Paths.Foldseek,
-			&config.Paths.FoldseekInterface,
+			// &config.Paths.FoldseekInterface,
 			&config.Paths.FoldMason,
 			&config.Paths.FoldDisco,
 			&config.Paths.FoldComp,

backend/worker.go

@@ -834,7 +834,7 @@ mv -f -- "${BASE}/query.lookup_tmp" "${BASE}/query.lookup"
 					dbpath = filepath.Clean(params.OverridePath)
 				}
 				parameters := []string{
-					config.Paths.FoldseekInterface,
+					config.Paths.Foldseek, //Interface,
 					"easy-interfacesearch",
 					inputFile,
 					dbpath,

docker-compose/config.json

@@ -15,7 +15,6 @@
         "temporary"    : "/tmp",
         "mmseqs"       : "/usr/local/bin/mmseqs",
         "foldseek"     : "/usr/local/bin/foldseek",
-        "foldseekinterface" : "/usr/local/bin/foldseek-interface",
         "foldmason"    : "/usr/local/bin/foldmason",
         "folddisco"    : "/usr/local/bin/folddisco",
         "foldcomp"    : "/usr/local/bin/foldcomp"