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test-ppc-intervals.R
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239 lines (185 loc) · 8.1 KB
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source(test_path("data-for-ppc-tests.R"))
test_that("ppc_intervals returns ggplot object", {
expect_gg(ppc_intervals(y, yrep))
expect_gg(ppc_intervals(y, yrep, size = 2, fatten = 1))
expect_gg(ppc_intervals(y, yrep, x = seq(1, 2 * length(y), by = 2)))
expect_gg(ppc_intervals(y2, yrep2))
# ppd versions
expect_gg(ppd_intervals(yrep, x = seq(1, 2 * length(y), by = 2)))
expect_gg(ppd_intervals(yrep2))
})
test_that("ppc_ribbon returns ggplot object", {
expect_gg(ppc_ribbon(y, yrep, prob = 0.5))
expect_gg(ppc_ribbon(y, yrep, alpha = 0, size = .5))
expect_gg(ppc_ribbon(y2, yrep2, x = rnorm(length(y2)), prob = 0.5))
# ppd versions
expect_gg(ppd_ribbon(yrep, prob = 0.5))
expect_gg(ppd_ribbon(yrep2, x = rnorm(length(y2)), prob = 0.5))
})
y <- rnorm(50)
yrep <- matrix(rnorm(500, 0, 2), ncol = 50)
x <- rep(1:10, each = 5)
grp <- gl(5, 1, length = 50, labels = LETTERS[1:5])
d <- ppc_intervals_data(y, yrep, x = 1:length(y), prob = .9)
d_group <- ppc_intervals_data(y, yrep, x, grp)
test_that("ppc_intervals_grouped returns ggplot object", {
expect_gg(ppc_intervals_grouped(y, yrep, x, grp))
# ppd versions
expect_gg(ppd_intervals_grouped(yrep, x, grp))
})
test_that("ppc_ribbon_grouped returns ggplot object", {
expect_gg(ppc_ribbon_grouped(y, yrep, x, grp))
expect_gg(ppc_ribbon_grouped(y, yrep, x, grp, facet_args = list(scales = "fixed")))
# ppd versions
expect_gg(ppd_ribbon_grouped(yrep, x, grp, facet_args = list(scales = "fixed")))
})
test_that("ppc_intervals_data returns correct structure", {
expect_named(d, c("y_id", "y_obs", "x",
"outer_width", "inner_width",
"ll", "l", "m", "h", "hh"))
expect_named(d_group, c("y_id", "y_obs", "group", "x",
"outer_width", "inner_width",
"ll", "l", "m", "h", "hh"))
expect_error(
ppc_intervals_data(y, yrep, x = 1:length(y), prob = 0), "prob")
expect_error(
ppc_intervals_data(y, yrep, x = 1:length(y), prob = 1.01), "prob")
expect_error(
ppc_intervals_data(y, yrep, x = 1:length(y), prob_outer = 0), "prob_outer")
expect_error(
ppc_intervals_data(y, yrep, x = 1:length(y), prob_outer = 1.01), "prob_outer")
})
test_that("ppd_intervals_data + y_obs column same as ppc_intervals_data", {
d2 <- ppd_intervals_data(yrep, x = 1:length(y), prob = .9)
d_group2 <- ppd_intervals_data(yrep, x, grp)
expect_equal(tibble::add_column(d2, y_obs = d$y_obs, .after = "y_id"), d)
expect_equal(tibble::add_column(d_group2, y_obs = d_group$y_obs, .after = "y_id"), d_group)
})
test_that("ppd_intervals_data handles single observation and single draw", {
yrep_1obs <- matrix(rnorm(25), ncol = 1)
d <- ppd_intervals_data(yrep_1obs)
expect_equal(nrow(d), 1)
expect_true(d$ll <= d$l && d$l <= d$m && d$m <= d$h && d$h <= d$hh)
# single draw: all quantiles collapse to the value
yrep_1draw <- matrix(rnorm(10), nrow = 1)
d2 <- ppd_intervals_data(yrep_1draw)
expect_equal(d2$ll, d2$m)
expect_equal(d2$hh, d2$m)
})
test_that("ppc_intervals_data does math correctly", {
d <- ppc_intervals_data(y, yrep, prob = .4, prob_outer = .8)
qs <- unname(quantile(yrep[, 1], c(.1, .3, .5, .7, .9)))
expect_equal(d$ll[1], qs[1])
expect_equal(d$l[1], qs[2])
expect_equal(d$m[1], qs[3])
expect_equal(d$h[1], qs[4])
expect_equal(d$hh[1], qs[5])
# Testing groups and known quantiles
y <- rep(10, 4)
group <- c("a", "a", "b", "b")
yrep_g1 <- matrix(rep((0:20), 2), ncol = 2)
yrep_g2 <- yrep_g1 - 10
yrep <- cbind(yrep_g1, yrep_g2)
d <- ppc_intervals_data(y, yrep, group = group, prob = .5, prob_outer = .9)
expect_equal(unique(d$inner_width), .5)
expect_equal(unique(d$outer_width), .9)
expect_equal(d$ll, c( 1, 1, -9, -9))
expect_equal(d$l, c( 5, 5, -5, -5))
expect_equal(d$m, c(10, 10, 0, 0))
expect_equal(d$h, c(15, 15, 5, 5))
expect_equal(d$hh, c(19, 19, 9, 9))
})
# Visual tests -----------------------------------------------------------------
test_that("ppc_intervals renders correctly", {
testthat::skip_on_cran()
testthat::skip_if_not_installed("vdiffr")
skip_on_r_oldrel()
p_base <- ppc_intervals(vdiff_y, vdiff_yrep)
vdiffr::expect_doppelganger("ppc_intervals (default)", p_base)
p_x <- ppc_intervals(vdiff_y, vdiff_yrep, x = vdiff_y)
vdiffr::expect_doppelganger("ppc_intervals (x values)", p_x)
p_50 <- ppc_intervals(vdiff_y, vdiff_yrep, prob = .50)
vdiffr::expect_doppelganger("ppc_intervals (interval width)", p_50)
# ppd versions
p_base <- ppd_intervals(vdiff_yrep)
vdiffr::expect_doppelganger("ppd_intervals (default)", p_base)
p_x <- ppd_intervals(vdiff_yrep, x = vdiff_y)
vdiffr::expect_doppelganger("ppd_intervals (x values)", p_x)
p_50 <- ppd_intervals(vdiff_yrep, prob = .50)
vdiffr::expect_doppelganger("ppd_intervals (interval width)", p_50)
})
test_that("ppc_intervals_grouped renders correctly", {
testthat::skip_on_cran()
testthat::skip_if_not_installed("vdiffr")
skip_on_r_oldrel()
p_base <- ppc_intervals_grouped(vdiff_y, vdiff_yrep, group = vdiff_group)
vdiffr::expect_doppelganger("ppc_intervals_grouped (default)", p_base)
p_x <- ppc_intervals_grouped(
y = vdiff_y,
yrep = vdiff_yrep,
x = vdiff_y,
group = vdiff_group)
vdiffr::expect_doppelganger("ppc_intervals_grouped (x values)", p_x)
# ppd versions
p_base <- ppd_intervals_grouped(vdiff_yrep, group = vdiff_group)
vdiffr::expect_doppelganger("ppd_intervals_grouped (default)", p_base)
p_x <- ppd_intervals_grouped(
ypred = vdiff_yrep,
x = vdiff_y,
group = vdiff_group)
vdiffr::expect_doppelganger("ppd_intervals_grouped (x values)", p_x)
})
test_that("ppc_ribbon renders correctly", {
testthat::skip_on_cran()
testthat::skip_if_not_installed("vdiffr")
skip_on_r_oldrel()
p_base <- ppc_ribbon(vdiff_y, vdiff_yrep)
vdiffr::expect_doppelganger("ppc_ribbon (default)", p_base)
p_x <- ppc_ribbon(vdiff_y, vdiff_yrep, x = vdiff_y)
vdiffr::expect_doppelganger("ppc_ribbon (x values)", p_x)
p_50 <- ppc_ribbon(vdiff_y, vdiff_yrep, prob = 0.5)
vdiffr::expect_doppelganger("ppc_ribbon (interval width)", p_50)
p_line <- ppc_ribbon(vdiff_y, vdiff_yrep, y_draw = "line")
vdiffr::expect_doppelganger("ppc_ribbon (y_draw = line)", p_line)
p_point <- ppc_ribbon(vdiff_y, vdiff_yrep, y_draw = "point")
vdiffr::expect_doppelganger("ppc_ribbon (y_draw = point)", p_point)
p_both <- ppc_ribbon(vdiff_y, vdiff_yrep, y_draw = "both")
vdiffr::expect_doppelganger("ppc_ribbon (y_draw = both)", p_both)
# ppd versions
p_base <- ppd_ribbon(vdiff_yrep)
vdiffr::expect_doppelganger("ppd_ribbon (default)", p_base)
p_x <- ppd_ribbon(vdiff_yrep, x = vdiff_y)
vdiffr::expect_doppelganger("ppd_ribbon (x values)", p_x)
p_50 <- ppd_ribbon(vdiff_yrep, prob = 0.5)
vdiffr::expect_doppelganger("ppd_ribbon (interval width)", p_50)
})
test_that("ppc_ribbon_grouped renders correctly", {
testthat::skip_on_cran()
testthat::skip_if_not_installed("vdiffr")
skip_on_r_oldrel()
p_base <- ppc_ribbon_grouped(vdiff_y, vdiff_yrep, group = vdiff_group)
vdiffr::expect_doppelganger("ppc_ribbon_grouped (default)", p_base)
p_line <- ppc_ribbon_grouped(vdiff_y, vdiff_yrep, group = vdiff_group,
y_draw = "line")
vdiffr::expect_doppelganger("ppc_ribbon_grouped (y_draw = line)", p_line)
p_point <- ppc_ribbon_grouped(vdiff_y, vdiff_yrep, group = vdiff_group,
y_draw = "point")
vdiffr::expect_doppelganger("ppc_ribbon_grouped (y_draw = point)", p_point)
p_both <- ppc_ribbon_grouped(vdiff_y, vdiff_yrep, group = vdiff_group,
y_draw = "both")
vdiffr::expect_doppelganger("ppc_ribbon_grouped (y_draw = both)", p_both)
p_x <- ppc_ribbon_grouped(
y = vdiff_y,
yrep = vdiff_yrep,
x = vdiff_y,
group = vdiff_group)
vdiffr::expect_doppelganger("ppc_ribbon_grouped (x values)", p_x)
# ppd versions
p_base <- ppd_ribbon_grouped(vdiff_yrep, group = vdiff_group)
vdiffr::expect_doppelganger("ppd_ribbon_grouped (default)", p_base)
p_x <- ppd_ribbon_grouped(
ypred = vdiff_yrep,
x = vdiff_y,
group = vdiff_group)
vdiffr::expect_doppelganger("ppd_ribbon_grouped (x values)", p_x)
})