bumped version

Author: stschiff

Changelog.md

@@ -1,26 +1,17 @@
-V 1.2.3 : Adapted to newest sequence-formats. Had to change all the chromosome-related code to the newType Chrom datatype. Also started implementing normaliseBimWithVCF.
-
-V 1.2.4: normaliseBimWithVCF is ready.
-
-V 1.3.0: Lots of refactoring. Lots of testing. Removed some features in vcf2eigenstrat and in pileupCaller, including
-         the option in pileupCaller to call without a SNP file.
-
-V 1.3.1: Bumped dependency on sequence-formats to new sequence-formats-1.4.0, which includes strand-information in pileup data, as well as 
-         rsIds in freqSum to output the correct rsId, and an option to parse chromosomes X, Y and MT.
-
-V 1.4.0: Added single strand mode, and new triallelic treatment.
-
-V 1.4.0.1: Improved README, fixed output bug in genoStats.hs
-
-V 1.4.0.3: Updated to new sequence-formats version, now including reading of genetic position from eigenstrat files.
-
-V 1.4.0.4:
-* Fixed eigenstrat-output in pileupCaller to add a dot after the outputprefix before the file extensions.
-* Updated haskell-stack wrapper scripts for EIGENSOFT and ADMIXTOOLS.
-* Moved unmaintained scripts into unmaintained folder.
-
-V 1.5.0: Added support for Plink output
-
-V 1.5.1: Added automatic building
-
-V 1.5.2: Fixed a bug with --samplePopName having to be entered after -p or -e. Fixed a bug in the sequence-formats dependency.
+# Changelog
+
+- V 1.2.3 : Adapted to newest sequence-formats. Had to change all the chromosome-related code to the newType Chrom datatype. Also started implementing normaliseBimWithVCF.
+- V 1.2.4: normaliseBimWithVCF is ready.
+- V 1.3.0: Lots of refactoring. Lots of testing. Removed some features in vcf2eigenstrat and in pileupCaller, including
+-          the option in pileupCaller to call without a SNP file.
+- V 1.3.1: Bumped dependency on sequence-formats to new sequence-formats-1.4.0, which includes strand-information in pileup data, as well as rsIds in freqSum to output the correct rsId, and an option to parse chromosomes X, Y and MT.
+- V 1.4.0: Added single strand mode, and new triallelic treatment.
+- V 1.4.0.1: Improved README, fixed output bug in genoStats.hs
+- V 1.4.0.3: Updated to new sequence-formats version, now including reading of genetic position from eigenstrat files.
+- V 1.4.0.4:
+    * Fixed eigenstrat-output in pileupCaller to add a dot after the outputprefix before the file extensions.
+    * Updated haskell-stack wrapper scripts for EIGENSOFT and ADMIXTOOLS.
+    * Moved unmaintained scripts into unmaintained folder.
+- V 1.5.0: Added support for Plink output
+- V 1.5.1: Added automatic building
+- V 1.5.2: Fixed a bug with --samplePopName having to be entered after -p or -e. Fixed a bug in the sequence-formats dependency.

sequenceTools.cabal

@@ -1,5 +1,5 @@
 name:                sequenceTools
-version:             1.5.2
+version:             1.5.3
 synopsis:            A package with tools for processing DNA sequencing data
 description:         The tools in this package process sequencing Data, in particular from ancient DNA sequencing libraries. Key tool in this package is pileupCaller, a tool to randomly sample genotypes from sequencing data.
 license:             GPL-3