added aarch64 centos build

Author: stschiff

.github/workflows/Dockerfile.centos_aarch64

@@ -0,0 +1,21 @@
+FROM quay.io/bioconda/bioconda-utils-build-env-cos7-aarch64
+
+RUN yum -y update
+RUN yum -y install zlib-devel wget ncurses-devel ncurses-compat-libs make gcc gcc-c++
+
+# Install GHC since stack's local install has issues
+RUN wget https://downloads.haskell.org/~ghc/9.6.6/ghc-9.6.6-x86_64-centos7-linux.tar.xz
+RUN tar xvf ghc-9.6.6-x86_64-centos7-linux.tar.xz
+RUN cd ghc-9.6.6-x86_64-unknown-linux; ./configure; make install
+
+# install stack
+RUN curl -sSL https://get.haskellstack.org/ | sh
+
+# add source directory
+ADD . source
+WORKDIR source
+
+# install
+# - as described in cryptonite README, cryptoniate requires disabling "use_target_attributes"
+# - for bitvec the "simd" flag added in v1.1.5.0 has to be deactivated - the gcc version here does not seem to support it
+RUN stack install --system-ghc --flag cryptonite:-use_target_attributes --flag bitvec:-simd

.github/workflows/release.yaml

@@ -108,4 +108,32 @@ jobs:
           allowUpdates: true
           artifactErrorsFailBuild: true
           artifacts: pileupCaller-conda-linux
+          artifactContentType: application/octet-stream
+
+  build_centos_artifact_aarch64:
+    needs: [create_release]
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Checkout repo
+        uses: actions/checkout@v4
+
+      - name: Build Docker image
+        run: docker build -t linux -f .github/workflows/Dockerfile.centos_aarch64 .
+
+      - name: Create container
+        run: docker create --name linuxcontainer_aarch64 linux
+
+      - name: Copy executable
+        run: docker cp linuxcontainer_aarch64:/root/.local/bin/pileupCaller pileupCaller-conda-linux-aarch64
+
+      - name: Upload Release Asset
+        id: upload-release-asset
+        uses: ncipollo/release-action@v1
+        with:
+          name: Release ${{ github.ref_name }}
+          draft: true
+          allowUpdates: true
+          artifactErrorsFailBuild: true
+          artifacts: pileupCaller-conda-linux-aarch64
           artifactContentType: application/octet-stream