stumpy/.github/workflows/github-actions.yml at fcbc17bd71de7e0268fcb9d10967f56d3e5111d0 · stumpy-dev/stumpy · GitHub

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name: Tests
on:
  push:
    branches: main
  pull_request:
    branches: main
  workflow_dispatch:
  schedule:
    - cron: '0 14 * * *'  # 2pm UTC == 9am EST
jobs:
  generate_python_matrix:
    runs-on: ubuntu-latest
    outputs:
      python_versions: ${{ steps.set-matrix.outputs.python_versions }}
      min_python_version: ${{ steps.set-matrix.outputs.min_python_version }}
    steps:
      - name: Checkout STUMPY
        uses: actions/checkout@v4
        with:
          repository: stumpy-dev/stumpy
      - name: Upgrade Pip, Install Minimum Requirements
        run: |
          python -m pip install --upgrade pip pandas lxml packaging
        shell: bash
      - name: Generate Python versions
        id: set-matrix
        run: |
          MIN_PYTHON=$(python ./versions.py -mode min | grep python | awk '{print $2}')
          MAX_PYTHON=$(python ./versions.py -mode max | grep python | awk '{print $2}')
          echo "python_versions=$(python ./versions.py -mode range $MIN_PYTHON $MAX_PYTHON)" >> $GITHUB_OUTPUT
          echo "min_python_version=\"$MIN_PYTHON\"" >> $GITHUB_OUTPUT
        shell: bash
  minimum-version-testing:
    needs: generate_python_matrix
    runs-on: ${{ matrix.os }}
    strategy:
      matrix:
        os: [ubuntu-latest, macos-latest, windows-latest]
    steps:
      - uses: actions/checkout@v4
      - name: Set Up Python
        uses: actions/setup-python@v5
        with:
          python-version: ${{ fromJSON(needs.generate_python_matrix.outputs.min_python_version) }}
      - name: Display Python Version
        run: python -c "import sys; print(sys.version)"
        shell: bash
      - name: Upgrade Pip
        run: python -m pip install --upgrade pip
        shell: bash
      - name: Generate Minimum Requirements File
        run: sed 's/>/=/g' requirements.txt | sed 's/$/\.*/g'  > requirements.min.txt
        shell: bash
      - name: Install Minimum Requirements
        run: python -m pip install --upgrade -r requirements.min.txt
        shell: bash
      - name: Install STUMPY And Other Dependencies
        run: python -m pip install --editable .[ci]
        shell: bash
      - name: Run Black
        run: black --check --diff ./
        shell: bash
      - name: Run Flake8
        run: flake8 ./
        shell: bash
      - name: Install and Link OpenMP
        run: |
             if [ "$RUNNER_OS" == "macOS" ]; then
                  echo "Installing OpenMP"
                  brew install libomp
                  echo "Linking OpenMP"
                  brew link --force libomp
                  echo "Find OpenMP Linking Location"
                  libfile=`brew list libomp --verbose | grep libomp.dylib`
                  echo $libfile
                  echo "Changing  @rpath for the omppool.cpython-x-darwin.so shared object to look in $libfile"
                  ls "$(python -c 'import site; print(site.getsitepackages()[0])')"/numba/np/ufunc/omppool.*.so | xargs install_name_tool -change @rpath/libomp.dylib $libfile
             fi
        shell: bash
      - name: Show Full Numba Environment
        run: python -m numba -s
        shell: bash
      - name: Run Unit Tests
        run: ./test.sh unit
        shell: bash
  unit-testing:
    needs: generate_python_matrix
    runs-on: ${{ matrix.os }}
    strategy:
      matrix:
        os: [ubuntu-latest, macos-latest, windows-latest]
        python-version: ${{ fromJSON(needs.generate_python_matrix.outputs.python_versions) }}
    steps:
      - uses: actions/checkout@v4
      - name: Set Up Python
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python-version }}
      - name: Display Python Version
        run: python -c "import sys; print(sys.version)"
        shell: bash
      - name: Upgrade Pip
        run: python -m pip install --upgrade pip
        shell: bash
      - name: Install STUMPY And Other Dependencies
        run: python -m pip install --editable .[ci]
        shell: bash
      - name: Run Black
        run: black --check --diff ./
        shell: bash
      - name: Run Flake8
        run: flake8 ./
        shell: bash
      - name: Install OpenMP
        run: |
             if [ "$RUNNER_OS" == "macOS" ]; then
                  echo "Installing OpenMP"
                  brew install libomp
                  echo "Linking OpenMP"
                  brew link --force libomp
                  echo "Find OpenMP Linking Location"
                  libfile=`brew list libomp --verbose | grep libomp.dylib`
                  echo $libfile
                  echo "Changing  @rpath for the omppool.cpython-x-darwin.so shared object to look in $libfile"
                  ls "$(python -c 'import site; print(site.getsitepackages()[0])')"/numba/np/ufunc/omppool.*.so | xargs install_name_tool -change @rpath/libomp.dylib $libfile
             fi
        shell: bash
      - name: Show Full Numba Environment
        run: python -m numba -s
        shell: bash
      - name: Run Unit Tests
        run: ./test.sh unit
        shell: bash
  coverage-testing:
    needs: generate_python_matrix
    runs-on: ${{ matrix.os }}
    strategy:
      matrix:
        os: [ubuntu-latest, macos-latest, windows-latest]
        python-version: ${{ fromJSON(needs.generate_python_matrix.outputs.python_versions) }}
    steps:
      - uses: actions/checkout@v4
      - name: Set Up Python
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python-version }}
      - name: Display Python Version
        run: python -c "import sys; print(sys.version)"
        shell: bash
      - name: Upgrade Pip
        run: python -m pip install --upgrade pip
        shell: bash
      - name: Install STUMPY And Other Dependencies
        run: python -m pip install --editable .[ci]
        shell: bash
      - name: Run Black
        run: black --check --diff ./
        shell: bash
      - name: Run Flake8
        run: flake8 ./
        shell: bash
      - name: Link OpenMP
        run: |
             if [ "$RUNNER_OS" == "macOS" ]; then
                  echo "Installing OpenMP"
                  brew install libomp
                  echo "Linking OpenMP"
                  brew link --force libomp
                  echo "Find OpenMP Linking Location"
                  libfile=`brew list libomp --verbose | grep libomp.dylib`
                  echo $libfile
                  echo "Changing  @rpath for the omppool.cpython-x-darwin.so shared object to look in $libfile"
                  ls "$(python -c 'import site; print(site.getsitepackages()[0])')"/numba/np/ufunc/omppool.*.so | xargs install_name_tool -change @rpath/libomp.dylib $libfile
             fi
        shell: bash
      - name: Show Full Numba Environment
        run: python -m numba -s
        shell: bash
      - name: Run Coverage Tests
        run: ./test.sh coverage
        shell: bash