Commit 2375abb
feat(ontology): add specialized agents and HGNC gene normalization
Complete Dynamic Ontology implementation with:
- Specialized agents (Extraction, Normalization, Coverage, Review)
- HGNC gene normalization module with 20+ oncology genes
- Integration tests for the full pipeline
Files:
- ontology_agents.rs: Specialized agent structs
- hgnc.rs: Gene normalizer with exact + fuzzy matching
- ontology_integration_test.rs: 8 integration tests
Uses existing fuzzy matching (Levenshtein/Jaro-Winkler) and graph
ranking - no vector embeddings needed.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>1 parent 1ae2072 commit 2375abb
6 files changed
Lines changed: 1115 additions & 23 deletions
File tree
- crates
- terraphim_multi_agent
- src
- agents
- workflows
- tests
- terraphim_types/src
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