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WIP:Whole sunday work
Signed-off-by: Alex Mikhalev <alex@metacortex.engineer>
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.docs/summary-CLAUDE.md

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@@ -19,7 +19,17 @@ Provides comprehensive guidance to Claude Code (claude.ai/code) when working wit
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- **Knowledge Graph System**: Thesaurus format, automata construction, rolegraph management
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- **AI Integration**: OpenRouter, Ollama support with LLM client abstraction
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## Recent Updates
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## Recent Updates (v1.0.0 Release)
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- **Multi-Language Package Ecosystem**: Added comprehensive Rust, Node.js, Python package information
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- **Package Manager Support**: Enhanced with Bun optimization for Node.js ecosystem
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- **CI/CD Infrastructure**: Updated with self-hosted runners and 1Password integration
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- **Grep.app Integration**: Added search across 500,000+ GitHub repositories
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- **MCP Server**: Complete Model Context Protocol implementation for AI integration
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- **Binary Update**: terraphim-tui → terraphim-agent with updated references
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- **Performance Metrics**: Added comprehensive benchmarks and optimization details
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- **Publishing Documentation**: Complete guides for multi-language package publishing
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## Legacy Updates
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- Added workspace structure section
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- Expanded crate documentation (agent systems, haystacks)
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- Added TUI build variations and feature flags

.docs/summary-README.md

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- **Rolegraph**: Knowledge graph using Aho-Corasick automata for ranking
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## Installation Options
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### 🎉 v1.0.0 Multi-Language Packages
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**🦀 Rust (crates.io)**:
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```bash
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cargo install terraphim_agent
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terraphim-agent --help
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```
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**📦 Node.js (npm)**:
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```bash
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npm install @terraphim/autocomplete
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# or with Bun
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bun add @terraphim/autocomplete
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```
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**🐍 Python (PyPI)**:
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```bash
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pip install terraphim-automata
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```
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### Traditional Installation
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- **Docker**: `docker run ghcr.io/terraphim/terraphim-server:latest`
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- **Homebrew**: `brew install terraphim/terraphim-ai/terraphim-ai`
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- **Quick Install**: `curl -fsSL https://raw.githubusercontent.com/terraphim/terraphim-ai/main/release/v0.2.3/install.sh | bash`
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- **Development**: `git clone && cargo run`
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## Development Setup
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1. Clone repository
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2. Install pre-commit hooks: `./scripts/install-hooks.sh`
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3. Start backend: `cargo run`
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4. Start frontend: `cd desktop && yarn run dev` (web) or `yarn run tauri dev` (desktop)
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5. TUI: `cargo build -p terraphim_tui --features repl-full --release`
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5. TUI: `cargo build -p terraphim_tui --features repl-full --release && ./target/release/terraphim-agent`
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## Important Details
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- Storage backends: Local by default (memory, dashmap, sqlite, redb); optional AWS S3 for cloud

.docs/summary-TESTING_SCRIPTS_README.md

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## Purpose
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Comprehensive documentation for testing scripts used in Novel editor autocomplete integration with Terraphim's knowledge graph system. Provides automated testing workflows and service management.
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**Updated for v1.0.0**: Now includes testing for multi-language packages (Rust, Node.js, Python) and comprehensive validation of autocomplete functionality across all platforms.
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## Key Scripts
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- **quick-start-autocomplete.sh**: Interactive menu with preset configurations (full, mcp, dev, test, status, stop)
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- **start-autocomplete-test.sh**: Main testing script with full control over services and configuration

.docs/summary-lessons-learned.md

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- **Categories**: Prompt injection, command injection, memory safety, network validation
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- **Coverage**: 99 comprehensive tests across multiple attack vectors
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**Pattern 6: Multi-Language Package Publishing Strategy**
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- **Context**: v1.0.0 release with Rust, Node.js, Python packages
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- **Learning**: Platform-specific bindings require different approaches but unified API design
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- **Rust (crates.io)**: Native publishing with comprehensive documentation
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- **Node.js (npm)**: NAPI bindings for zero-overhead native performance
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- **Python (PyPI)**: PyO3 bindings for maximum speed with universal wheels
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- **Key Success**: Consistent API design across all languages while leveraging platform strengths
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**Pattern 7: Comprehensive Multi-Package-Manager Support**
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- **Context**: Node.js ecosystem evolution beyond npm
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- **Learning**: Support multiple package managers for maximum reach
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- **Implementation**: npm + Bun optimization with performance benchmarking
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- **Benefits**: Faster installation (Bun), broader compatibility (npm), developer choice
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- **Testing**: Automated testing across all supported package managers
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**Pattern 8: CI/CD Infrastructure Migration**
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- **Context**: Earthly to GitHub Actions migration for self-hosted runners
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- **Learning**: Gradual migration with parallel systems reduces risk
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- **Approach**: Maintain Earthly while building GitHub Actions, then switch
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- **Key Benefits**: Self-hosted runners, 1Password integration, faster builds
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- **Security**: OIDC authentication for package publishing with secure token management
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## Technical Insights
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**UI Development**:

.docs/summary-memories.md

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## Critical Sections
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### v1.0.0 Major Release Achievements (2025-11-16)
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**Multi-Language Package Ecosystem (COMPLETE ✅)**:
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- **Rust terraphim_agent**: Published to crates.io with CLI/TUI interface
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- **Node.js @terraphim/autocomplete**: Published to npm with NAPI bindings and Bun support
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- **Python terraphim-automata**: Published to PyPI with PyO3 bindings
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- **10 Core Rust Crates**: All successfully published to crates.io
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- **Comprehensive CI/CD**: Self-hosted runners with 1Password integration
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**Enhanced Search Integration (COMPLETE ✅)**:
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- **Grep.app Integration**: Search across 500,000+ GitHub repositories
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- **Advanced Filtering**: Language, repository, and path-based filtering
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- **MCP Server**: Complete Model Context Protocol implementation
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- **Claude Code Hooks**: Automated workflows and integration templates
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**Documentation & Release (COMPLETE ✅)**:
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- **Comprehensive v1.0.0 Documentation**: README, release notes, API docs
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- **Multi-Language Installation Guides**: Step-by-step instructions
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- **GitHub Release**: Complete with changelog and installation instructions
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- **terraphim-agent Binary**: Successfully updated from terraphim-tui references
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### Recent Major Achievements (2025-10-08)
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**TruthForge Phase 5 UI Development (COMPLETE ✅)**:

.docs/summary-scratchpad.md

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- **System Status**: Current health of various components
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- **Phase Planning**: Upcoming work and priorities
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## Current Status (Latest Update: October 18, 2025)
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**✅ Phase 1 Security Testing Complete**
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- 43 security tests implemented (19 in terraphim-ai, 24 in firecracker-rust)
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- All critical vulnerabilities fixed: prompt injection, command injection, unsafe memory, network injection
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- 28 tests passing on bigbox validation
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- Risk level reduced from HIGH to MEDIUM
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**🔄 Phase 2 Security Bypass Testing - Ready to Start**
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- **Objective**: Test effectiveness of implemented security controls
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- **Timeline**: October 18-25, 2025
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- **Focus Areas**:
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- Advanced prompt injection bypass (encoding, context manipulation)
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- Command injection bypass (shell metacharacter evasion)
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- Memory safety bypass (buffer overflow attempts)
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- Network security bypass (interface name spoofing)
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## Current Status (Latest Update: November 16, 2025)
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**🎉 v1.0.0 MAJOR RELEASE COMPLETE**
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- Multi-language package ecosystem successfully released
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- All 10 core Rust crates published to crates.io
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- Node.js @terraphim/autocomplete published to npm with Bun support
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- Python terraphim-automata published to PyPI
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- Comprehensive documentation and GitHub release completed
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- terraphim-tui successfully renamed to terraphim-agent across all references
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**✅ v1.0.0 Release Achievements**
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- **Multi-Language Support**: Rust, Node.js, Python packages available
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- **Enhanced Search**: Grep.app integration (500K+ GitHub repos)
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- **AI Integration**: Complete MCP server and Claude Code hooks
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- **Infrastructure**: Self-hosted CI/CD runners with 1Password integration
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- **Performance**: Sub-2s startup, sub-millisecond search, optimized binaries
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**🔄 Next Development Phase - Ready to Start**
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- **Objective**: Build upon v1.0.0 foundation with advanced features
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- **Timeline**: November 2025 onward
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- **Potential Focus Areas**:
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- Enhanced WebAssembly support
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- Plugin architecture for extensions
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- Advanced AI model integrations
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- Performance optimizations and benchmarks
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## Critical Sections
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.docs/summary.md

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Terraphim AI is a privacy-first, locally-running AI assistant featuring multi-agent systems, knowledge graph intelligence, and secure code execution in Firecracker microVMs. The project combines Rust-based backend services with vanilla JavaScript frontends, emphasizing security, performance, and production-ready architecture.
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**Current Status**: Production-ready with active development on advanced features
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**Primary Technologies**: Rust (async/tokio), Svelte/Vanilla JS, Firecracker VMs, OpenRouter/Ollama LLMs
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**Current Status**: v1.0.0 RELEASED - Production-ready with comprehensive multi-language package ecosystem
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**Primary Technologies**: Rust (async/tokio), Svelte/Vanilla JS, Firecracker VMs, OpenRouter/Ollama LLMs, NAPI, PyO3
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**Test Coverage**: 99+ comprehensive tests with 59 passing in main workspace
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## System Architecture
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3. **Haystack Integration** (4 crates): atomic_client, clickup_client, query_rs_client, persistence
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4. **Infrastructure**: settings, tui, onepassword_cli, markdown_parser
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## 🎉 v1.0.0 Major Release Achievements
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### Multi-Language Package Ecosystem ✅
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**🦀 Rust - terraphim_agent (crates.io)**:
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- Complete CLI/TUI interface with REPL functionality
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- Sub-2 second startup times and 10MB optimized binary
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- Installation: `cargo install terraphim_agent`
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- Published with comprehensive documentation and examples
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**📦 Node.js - @terraphim/autocomplete (npm)**:
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- Native NAPI bindings with zero overhead
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- High-performance autocomplete engine using Aho-Corasick automata
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- Knowledge graph connectivity analysis and semantic search
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- Multi-platform support (Linux, macOS, Windows, ARM64)
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- Bun package manager optimization included
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- Installation: `npm install @terraphim/autocomplete`
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**🐍 Python - terraphim-automata (PyPI)**:
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- PyO3 bindings for maximum performance
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- Cross-platform wheels for all major platforms
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- Type hints and comprehensive documentation
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- Installation: `pip install terraphim-automata`
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### Enhanced Search Capabilities ✅
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**Grep.app Integration**:
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- Search across 500,000+ public GitHub repositories
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- Advanced filtering by language, repository, and path
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- Rate limiting and graceful error handling
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**Semantic Search Enhancement**:
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- Knowledge graph-powered semantic understanding
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- Context-aware relevance through graph connectivity
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- Multi-source integration (personal, team, public)
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### AI Integration & Automation ✅
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**MCP Server Implementation**:
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- Complete Model Context Protocol server for AI tool integration
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- All autocomplete and knowledge graph functions exposed as MCP tools
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- Transport support: stdio, SSE/HTTP with OAuth authentication
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**Claude Code Hooks**:
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- Automated workflows for seamless Claude Code integration
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- Template system for code analysis and evaluation
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- Quality assurance frameworks and comprehensive testing
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### Infrastructure Improvements ✅
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**CI/CD Migration**:
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- Complete migration from Earthly to GitHub Actions + Docker Buildx
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- Self-hosted runners for optimized build infrastructure
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- 1Password integration for secure token management
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- Multi-platform builds (Linux, macOS, Windows, ARM64)
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**10 Core Rust Crates Published**:
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1. terraphim_agent - Main CLI/TUI interface
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2. terraphim_automata - Text processing and autocomplete
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3. terraphim_rolegraph - Knowledge graph implementation
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4. terraphim_service - Main service layer
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5. terraphim_middleware - Haystack indexing and search
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6. terraphim_config - Configuration management
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7. terraphim_persistence - Storage abstraction
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8. terraphim_types - Shared type definitions
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9. terraphim_settings - Device and server settings
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10. terraphim_mcp_server - MCP server implementation
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### Performance Metrics ✅
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**Autocomplete Engine**:
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- Index Size: ~749 bytes for full engineering thesaurus
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- Search Speed: Sub-millisecond prefix search
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- Memory Efficiency: Compact serialized data structures
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**Knowledge Graph**:
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- Graph Size: ~856 bytes for complete role graphs
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- Connectivity Analysis: Instant path validation
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- Query Performance: Optimized graph traversal algorithms
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**Native Binaries**:
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- Binary Size: ~10MB (production optimized)
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- Startup Time: Sub-2 second CLI startup
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- Cross-Platform: Native performance on all supported platforms
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## Development Patterns and Best Practices
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### Learned Patterns (From lessons-learned.md)

.github/workflows/package-release.yml

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### 📦 Available Packages
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- **terraphim-server**: Main HTTP API server with semantic search
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- **terraphim-tui**: Terminal User Interface with interactive REPL
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- **terraphim-agent**: Terminal User Interface with interactive REPL
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### 🔧 Features
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- Privacy-first AI assistant that operates locally

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