Will `aggregate_cells` live in one of the tidy transcriptomics Bioc packages?

[mikelove]

Saw this from Constantin @const-ae

https://twitter.com/const_ae/status/1620368045846970370

[stemangiola]

Nice.

I don't know where to put it honestly. It is part of an internal tidysinglecell package, but that won't be public.

if you find a package suitable for it let me know, I would be happy to donate it :)

[mikelove]

Why not tidySingleCellExperiment?

[stemangiola]

Strictly speaking, tidySCE is an adaptor for tidyverse

[mikelove]

Maybe adding some simple code on how to pseudobulk to the landing page of tidySCE? It seems to be a common use case

[stemangiola]

Cool. I will ponder to add it to tidySCE and tidyseurat. Especially if it's needed.

[stemangiola]

Referenced here

tidyomics/tidySingleCellExperiment#54

[stemangiola]

Here the pull request

tidyomics/tidySingleCellExperiment#57