forked from zhijianzhouml/NAMMD
-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathdataloader.py
More file actions
528 lines (461 loc) · 17.8 KB
/
Copy pathdataloader.py
File metadata and controls
528 lines (461 loc) · 17.8 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
import numpy as np
import torch
from sklearn.utils import check_random_state
from sklearn.preprocessing import MinMaxScaler
import pickle
import torchvision.transforms as transforms
from torchvision import datasets
import sys
import os
def MMscaler(X, Y):
scaler = MinMaxScaler()
scaler.fit(np.concatenate((X, Y), axis=0))
return scaler.transform(X), scaler.transform(Y)
def MatConvert(x, device, dtype):
"""convert the numpy to a torch tensor."""
x = torch.from_numpy(x).to(device, dtype)
return x
def sample_BLOB(N, rs, check, scale):
"""#Feat. 2 # Inst. inf"""
rs = check_random_state(rs)
rows = 3
cols = 3
if check == 0:
"""Generate Blob-S for testing type-I error"""
sep = 1
correlation = 0
# generate within-blob variation
mu = np.zeros(2)
sigma = np.eye(2)
X = rs.multivariate_normal(mu, sigma, size=N)
corr_sigma = np.array([[1, correlation], [correlation, 1]])
Y = rs.multivariate_normal(mu, corr_sigma, size=N)
# assign to blobs
X[:, 0] += rs.randint(rows, size=N) * sep
X[:, 1] += rs.randint(cols, size=N) * sep
Y[:, 0] += rs.randint(rows, size=N) * sep
Y[:, 1] += rs.randint(cols, size=N) * sep
else:
"""Generate Blob-D for testing type-II error (or test power)"""
sigma_mx_2_standard = np.array([[0.03, 0], [0, 0.03]])
sigma_mx_2 = np.zeros([9, 2, 2])
for i in range(9):
sigma_mx_2[i] = sigma_mx_2_standard
if i < 4:
sigma_mx_2[i][0, 1] = -0.02 - 0.002 * i
sigma_mx_2[i][1, 0] = -0.02 - 0.002 * i
if i == 4:
sigma_mx_2[i][0, 1] = 0.00
sigma_mx_2[i][1, 0] = 0.00
if i > 4:
sigma_mx_2[i][1, 0] = 0.02 + 0.002 * (i - 5)
sigma_mx_2[i][0, 1] = 0.02 + 0.002 * (i - 5)
mu = np.zeros(2)
sigma = np.eye(2) * 0.03
X = rs.multivariate_normal(mu, sigma, size=N)
Y = rs.multivariate_normal(mu, np.eye(2), size=N)
# assign to blobs
X[:, 0] += rs.randint(rows, size=N)
X[:, 1] += rs.randint(cols, size=N)
Y_row = rs.randint(rows, size=N)
Y_col = rs.randint(cols, size=N)
locs = [[0, 0], [0, 1], [0, 2], [1, 0], [1, 1], [1, 2], [2, 0], [2, 1], [2, 2]]
for i in range(9):
corr_sigma = sigma_mx_2[i]
L = np.linalg.cholesky(corr_sigma)
ind = np.expand_dims((Y_row == locs[i][0]) & (Y_col == locs[i][1]), 1)
ind2 = np.concatenate((ind, ind), 1)
Y = np.where(ind2, np.matmul(Y, L) + locs[i], Y)
if scale:
X, Y = MMscaler(X, Y)
return X, Y
def sample_HDGM(N, rs, check, scale):
"""#Feat. 10 # Inst. inf"""
d = 10 # data dim
Num_clusters = 2 # number of modes
n = int(N / Num_clusters)
mu_mx = np.zeros([Num_clusters, d])
mu_mx[1] = mu_mx[1] + 0.5
sigma_mx_1 = np.identity(d)
X = np.zeros([n * Num_clusters, d])
Y = np.zeros([n * Num_clusters, d])
# Generate HDGM-D
for i in range(Num_clusters):
np.random.seed(seed=rs + i + 283)
X[n * (i):n * (i + 1), :] = np.random.multivariate_normal(mu_mx[i], sigma_mx_1, n)
for i in range(Num_clusters):
np.random.seed(seed=rs + i)
if check == 0:
Y[n * (i):n * (i + 1), :] = np.random.multivariate_normal(mu_mx[i], sigma_mx_1, n)
else:
sigma_mx_2 = [np.identity(d), np.identity(d)]
sigma_mx_2[0][0, 1] = 0.5
sigma_mx_2[0][1, 0] = 0.5
sigma_mx_2[1][0, 1] = -0.5
sigma_mx_2[1][1, 0] = -0.5
Y[n * (i):n * (i + 1), :] = np.random.multivariate_normal(mu_mx[i], sigma_mx_2[i], n)
if scale:
X, Y = MMscaler(X, Y)
return X, Y
def sample_HIGGS(N, rs, check, scale):
"""#Feat. 4 #Class 2 #Inst. [5170877,5829123]"""
np.random.seed(seed=rs)
try:
data = pickle.load(open('../../data/HIGGS_TST.pckl', 'rb'))
except Exception as e:
data = pickle.load(open('../data/HIGGS_TST.pckl', 'rb'))
if check == 0:
dataX = data[0]
dataY = data[0]
else:
dataX = data[0]
dataY = data[1]
del data
N1_T = dataX.shape[0]
N2_T = dataY.shape[0]
ind1 = np.random.choice(N1_T, N, replace=False)
ind2 = np.random.choice(N2_T, N, replace=False)
X = dataX[ind1, :4]
Y = dataY[ind2, :4]
if scale:
X, Y = MMscaler(X, Y)
return X, Y
def sample_MNIST(N, rs, check, scale):
"""#Feat. 28*28 #Class 2 #Inst. [10000,10000]"""
np.random.seed(seed=rs)
# True_MNIST
img_size = 32
try:
dataloader_FULL_te = torch.utils.data.DataLoader(
datasets.MNIST(
"../../data/mnist",
train=False,
download=False,
transform=transforms.Compose(
[transforms.Resize(img_size),
transforms.ToTensor(),
transforms.Normalize([0.5], [0.5]),
]
),
),
batch_size=10000,
shuffle=True,
)
except Exception as e:
dataloader_FULL_te = torch.utils.data.DataLoader(
datasets.MNIST(
"../data/mnist",
train=False,
download=False,
transform=transforms.Compose(
[transforms.Resize(img_size),
transforms.ToTensor(),
transforms.Normalize([0.5], [0.5]),
]
),
),
batch_size=10000,
shuffle=True,
)
for i, (imgs, Labels) in enumerate(dataloader_FULL_te):
dataX = np.array(imgs.view(len(imgs), -1))
# Fake_MNIST
try:
Fake_MNIST = pickle.load(open('../../data/Fake_MNIST_data_EP100_N10000.pckl', 'rb'))
except Exception as e:
Fake_MNIST = pickle.load(open('../data/Fake_MNIST_data_EP100_N10000.pckl', 'rb'))
dataY = torch.from_numpy(Fake_MNIST[0][:])
dataY = np.array(dataY.view(len(dataY), -1))
if check == 0:
N1_T = dataX.shape[0]
ind1 = np.random.choice(N1_T, N, replace=False)
ind2 = np.random.choice(N1_T, N, replace=False)
X = dataX[ind1, :]
Y = dataX[ind2, :]
else:
N1_T = dataX.shape[0]
N2_T = dataY.shape[0]
ind1 = np.random.choice(N1_T, N, replace=False)
ind2 = np.random.choice(N2_T, N, replace=False)
X = dataX[ind1, :]
Y = dataY[ind2, :]
if scale:
X, Y = MMscaler(X, Y)
return X, Y
def sample_CIFAR10(N, rs, check, scale):
"""#Feat. 64*64 #Class 2 #Inst. [10000,2021]"""
np.random.seed(seed=rs)
img_size = 32
try:
dataset_test = datasets.CIFAR10(root='../../data/cifar10', download=False, train=False,
transform=transforms.Compose([
transforms.Resize(img_size),
transforms.ToTensor(),
transforms.Normalize((0.5, 0.5, 0.5), (0.5, 0.5, 0.5)),
# transforms.Grayscale(),
]))
except Exception as e:
dataset_test = datasets.CIFAR10(root='../data/cifar10', download=False, train=False,
transform=transforms.Compose([
transforms.Resize(img_size),
transforms.ToTensor(),
transforms.Normalize((0.5, 0.5, 0.5), (0.5, 0.5, 0.5)),
# transforms.Grayscale(),
]))
dataloader_test = torch.utils.data.DataLoader(dataset_test, batch_size=10000,
shuffle=True)
# Obtain CIFAR10 images
for i, (imgs, Labels) in enumerate(dataloader_test):
data_all = np.array(imgs.view(len(imgs), -1))
try:
data_new = np.load('../../data/cifar10_X_adversarial.npy')
except Exception as e:
data_new = np.load('../data/cifar10_X_adversarial.npy')
data_T = data_new.reshape((-1, 3, img_size, img_size))
ind_M = np.random.choice(len(data_T), len(data_T), replace=False)
data_T = data_T[ind_M]
TT = transforms.Compose([transforms.Resize(img_size),
transforms.ToTensor(),
transforms.Normalize((0.5, 0.5, 0.5), (0.5, 0.5, 0.5)),
transforms.Grayscale(),
])
trans = transforms.ToPILImage()
data_trans = torch.zeros([len(data_T), 3, img_size, img_size])
data_T_tensor = torch.from_numpy(data_T)
for i in range(len(data_T)):
d0 = trans(data_T_tensor[i])
data_trans[i] = TT(d0)
data_trans = np.array(data_trans.view(len(data_trans), -1))
if check == 0:
Ind = np.random.choice(len(data_all), N, replace=False)
X = data_all[Ind]
Ind_v4 = np.random.choice(len(data_all), N, replace=False)
Y = data_all[Ind_v4]
else:
Ind = np.random.choice(len(data_all), N, replace=False)
X = data_all[Ind]
Ind_v4 = np.random.choice(len(data_trans), N, replace=False)
Y = data_trans[Ind_v4]
if scale:
X, Y = MMscaler(X, Y)
#"""transform to tensor"""
# X = torch.from_numpy(X)
# X = X.resize(len(X),3,img_size,img_size)
return X, Y
def load_data(name, N, rs, check=1, scale=True):
if name == 'BLOB':
X, Y = sample_BLOB(N, rs, check, scale)
elif name == 'HDGM':
X, Y = sample_HDGM(N, rs, check, scale)
elif name == 'HIGGS':
X, Y = sample_HIGGS(N, rs, check, scale)
elif name == 'MNIST':
X, Y = sample_MNIST(N, rs, check, scale)
elif name == 'CIFAR10':
X, Y = sample_CIFAR10(N, rs, check, scale)
else:
print('No Dataset: ', name)
return X, Y
def NAMMD_discrete(X, Y, N1, sigma0, K = 1):
def h1_mean_var_gram(Kx, Ky, Kxy, K = 1):
"""compute value of VMD and std of VMD using kernel matrix."""
nx = Kx.shape[0]
ny = Ky.shape[0]
xx = torch.div(torch.sum(Kx), (nx * nx))
yy = torch.div(torch.sum(Ky), (ny * ny))
xy = torch.div(torch.sum(Kxy), (nx * ny))
MMD = xx - 2 * xy + yy
Reg = 4 * K - xx - yy
return MMD, Reg
def Pdist2(x, y):
# """compute the paired distance between x and y."""
x_norm = (x ** 2).sum(1).view(-1, 1)
y_norm = (y ** 2).sum(1).view(1, -1)
Pdist = x_norm + y_norm - 2.0 * torch.mm(x, torch.transpose(y, 0, 1))
Pdist[Pdist<0]=0
return Pdist
Dxx = Pdist2(X, X)
Dyy = Pdist2(Y, Y)
Dxy = Pdist2(X, Y)
Kx = torch.exp(-Dxx / sigma0**2)
Ky = torch.exp(-Dyy / sigma0**2)
Kxy = torch.exp(-Dxy / sigma0**2)
return h1_mean_var_gram(Kx, Ky, Kxy, K)
def construct_distributions(name, N, rs, eps, learning_rate, sigma0, K, device, dtype, scale=True):
if eps == 0:
X, _ = load_data(name, N, rs, 0, scale)
X = MatConvert(X, device, dtype)
Y = X
MMD, Reg = NAMMD_discrete(X, Y, N, sigma0, K)
else:
X, Y = load_data(name, N, rs, 1, scale)
np.random.seed(seed=1102)
torch.manual_seed(1102)
torch.cuda.manual_seed(1102)
X = MatConvert(X, device, dtype)
Y = MatConvert(Y, device, dtype)
X.requires_grad = True
Y.requires_grad = True
optimizer = torch.optim.Adam([X,Y], lr=learning_rate)
MMD, Reg = NAMMD_discrete(X, Y, N, sigma0, K)
t = 0
while abs((MMD/Reg).item() - eps) >= 10**(-7):
MMD, Reg = NAMMD_discrete(X, Y, N, sigma0, K)
STAT_u = (MMD/Reg - eps)**2
# Initialize optimizer and Compute gradient
optimizer.zero_grad()
STAT_u.backward(retain_graph=True)
# Update weights using gradient descent
optimizer.step()
if t % 100 == 0:
print("MMD_value: ", MMD.item(), "Reg_value: ", Reg.item())
t += 1
return X.detach(), Y.detach(), MMD.item(), Reg.item()
def construct_distributions_norm(name, N, rs, eps, learning_rate, sigma0, K, device, dtype, scale=True):
def Pdist2(x, y):
"""compute the paired distance between x and y."""
x_norm = (x ** 2).sum(1).view(-1, 1)
y_norm = (y ** 2).sum(1).view(1, -1)
Pdist = x_norm + y_norm - 2.0 * torch.mm(x, torch.transpose(y, 0, 1))
Pdist[Pdist<0]=0
return Pdist
X, _ = load_data(name, N, rs, 0, scale)
np.random.seed(seed=1102)
torch.manual_seed(1102)
torch.cuda.manual_seed(1102)
X = MatConvert(X, device, dtype)
X.requires_grad = True
optimizer = torch.optim.Adam([X], lr=learning_rate)
Norm = None
t = 0
while Norm == None or abs(Norm - eps) >= 10**(-5):
Dxx = Pdist2(X, X)
Kx = torch.exp(-Dxx / sigma0**2)
Norm = torch.div(torch.sum(Kx), (N * N))
STAT = (Norm - eps)**2
optimizer.zero_grad()
STAT.backward(retain_graph=True)
# Update weights using gradient descent
optimizer.step()
if t % 100 == 0:
print("Norm: ", Norm.item())
t += 1
return X.detach(), Norm.detach()
def NAMMD_discrete_P(Z, P1, P2, N, sigma0, K = 1):
def h1_mean_var_gram(Kzz, P11, P12, P22, K = 1):
"""compute value of VMD and std of VMD using kernel matrix."""
xx = torch.sum(Kzz * P11)
yy = torch.sum(Kzz * P22)
xy = torch.sum(Kzz * P12)
MMD = xx - 2 * xy + yy
Reg = 4 * K - xx - yy
return MMD, Reg
def Pdist2(x, y):
"""compute the paired distance between x and y."""
x_norm = (x ** 2).sum(1).view(-1, 1)
y_norm = (y ** 2).sum(1).view(1, -1)
Pdist = x_norm + y_norm - 2.0 * torch.mm(x, torch.transpose(y, 0, 1))
Pdist[Pdist<0]=0
return Pdist
def Prob(P1, P2, N):
"""compute the paired distance between x and y."""
P1 = P1.reshape(N,1)
P2 = P2.reshape(N,1)
return P1 @ P2.t()
Dzz = Pdist2(Z, Z)
Kzz = torch.exp(-Dzz / sigma0**2)
P11 = Prob(P1,P1,N)
P12 = Prob(P1,P2,N)
P22 = Prob(P2,P2,N)
return h1_mean_var_gram(Kzz, P11, P12, P22, K)
def construct_distributions_tv(name, N, rs, delt1, delt2, sigma0, K, device, dtype, way="uni", num = 2, scale=True):
np.random.seed(seed=rs)
torch.manual_seed(rs)
torch.cuda.manual_seed(rs)
Z = None
P1 = None
P2 = None
MMD1 = None
Reg1 = None
MMD2 = None
Reg2 = None
if way == "uni":
tt = 0
while True:
Z, _ = load_data(name, N, rs + tt, 0, scale)
P_uniform = np.ones(N) / N
P1 = np.ones(N) / N
P2 = np.ones(N) / N
ind = np.random.choice(N, N, replace=False)
# divide into new X, Y
indx = ind[:N//2]
indy = ind[N//2:]
P1[indx] += delt1/N
P1[indy] -= delt1/N
P2[indx] += delt2/N
P2[indy] -= delt2/N
P_uniform = MatConvert(P_uniform, device, dtype)
P1 = MatConvert(P1, device, dtype)
P2 = MatConvert(P2, device, dtype)
Z = MatConvert(Z, device, dtype)
if delt1 == delt2:
break
MMD1, Reg1 = NAMMD_discrete_P(Z, P_uniform, P1, N, sigma0, K)
MMD2, Reg2 = NAMMD_discrete_P(Z, P_uniform, P2, N, sigma0, K)
if MMD1/Reg1 < MMD2/Reg2:
break
tt += 1
else:
tt = 0
while True:
Z, _ = load_data(name, N, rs+tt, 0, scale)
P_uniform = np.ones(N) / N
P1 = np.ones(N) / N
P2 = np.ones(N) / N
distances = np.sum(abs(Z-Z[0])**2,axis=1)
sorted_indices = np.argsort(distances)
delt = delt1
idx = N//2
while delt > 0:
idxx = sorted_indices[idx]
change = min(P1[idxx], delt/2)
P1[idxx] = P1[idxx] - change
delt -= change * 2
if P1[idxx] == 0:
if idx >= N//2:
idx = N//2 - (idx-N//2) - 1
else:
idx = N//2 + (N//2-idx)
for i in range(num):
P1[sorted_indices[i]] += change/(2 * num)
P1[sorted_indices[-i-1]] += change/(2 * num)
delt = delt2
idx = N//2
while delt > 0:
idxx = sorted_indices[idx]
change = min(P2[idxx], delt/2)
P2[idxx] = P2[idxx] - change
delt -= change * 2
if P2[idxx] == 0:
if idx >= N//2:
idx = N//2 - (idx-N//2) - 1
else:
idx = N//2 + (N//2-idx)
for i in range(num):
P2[sorted_indices[i]] += change/(2 * num)
P2[sorted_indices[-i-1]] += change/(2 * num)
P_uniform = MatConvert(P_uniform, device, dtype)
P1 = MatConvert(P1, device, dtype)
P2 = MatConvert(P2, device, dtype)
Z = MatConvert(Z, device, dtype)
MMD1, Reg1 = NAMMD_discrete_P(Z, P_uniform, P1, N, sigma0, K)
MMD2, Reg2 = NAMMD_discrete_P(Z, P_uniform, P2, N, sigma0, K)
if delt1 == delt2:
break
if MMD1 < MMD2 and MMD1/Reg1 < MMD2/Reg2:
break
tt += 1
try:
return Z.detach(), P1, P2, MMD1.item(), Reg1.item(), MMD2.item(), Reg2.item()
except Exception as e:
return Z.detach(), P1, P2,None, None,None, None