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Add Steady State (COPASI-style) to VCell through CVODE (VCellODE) #1556

@CodeByDrescher

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@CodeByDrescher

Adding Steady State to VCell Release in a profound way means clearing a number of large hurdles:

  • Adding Steady State capability to the VCell-ODE project .
  • Adding relevant GUI windows, components, widgets, etc. for users to seamlessly run steady state. (see Steady State UI changes #1553)
  • Adding results window specifically for steady state results.
  • Expanding solver input files to request steady state.
  • Extending / adding new output file parsing for steady state results.
  • Integrating new Steady State capabilities into VCell SedML import Export.
  • Expanding VCML and BioModel to accept the new Steady State simulation settings.

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Java-basedPull requests that update Java codeSED-MLSolverscomponent of this work relies on work to at least one of the standalone VCell solversType: EpicAn epic with list of tasks and Epic fieldType: enhancementenhance existing featureUser Interface
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