numcodecs/.github/workflows/ci.yaml at 769845331d5cf26ae4e57ed47a6f415193c005fe · zarr-developers/numcodecs · GitHub

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name: Tests

on: [push, pull_request]

concurrency:
  group: ${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: true

jobs:
  build:
    runs-on: ${{ matrix.platform }}
    strategy:
      fail-fast: false
      matrix:
        python-version: ["3.12", "3.13", "3.14"]
        # macos-15-large is an intel runner, macos-14 is an arm64 runner
        platform: [ubuntu-latest, ubuntu-22.04-arm, windows-latest, macos-15-large, macos-14]

    defaults:
      run:
        shell: bash -el {0}

    steps:
      - name: Checkout source
        uses: actions/checkout@v5
        with:
          submodules: recursive
          fetch-depth: 0
          # https://github.com/actions/checkout/issues/2041 isn't released yet
          # fetch-tags: true # required for version resolution

      - name: Set up Python
        uses: actions/setup-python@v6
        with:
          python-version: ${{ matrix.python-version }}
          cache: 'pip'

      - name: Install numcodecs
        run: |
          # TODO: Remove this conditional when pcodec supports Python 3.14
          if [[ "${{ matrix.python-version }}" == "3.14" ]]; then
            python -m pip install -v ".[test,test_extras,msgpack,google_crc32c,crc32c,zfpy]"
          else
            python -m pip install -v ".[test,test_extras,msgpack,google_crc32c,crc32c,pcodec,zfpy]"
          fi

      - name: List installed packages
        run: python -m pip list

      - name: Run tests
        shell: "bash -l {0}"
        run: pytest -v

      - uses: codecov/codecov-action@v5
        with:
          fail_ci_if_error: true
          token: ${{ secrets.CODECOV_TOKEN }}
          verbose: true

  test-crc32c:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        include:
          - name: google-crc32c
            extras: "google_crc32c"
          - name: crc32c
            extras: "crc32c"
          - name: no-crc32c
            extras: ""

    defaults:
      run:
        shell: bash -el {0}

    steps:
      - name: Checkout source
        uses: actions/checkout@v5
        with:
          submodules: recursive
          fetch-depth: 0

      - name: Set up Python
        uses: actions/setup-python@v6
        with:
          python-version: ${{ matrix.python-version }}
          cache: 'pip'

      - name: Install numcodecs
        run: |
          if [[ -n "${{ matrix.extras }}" ]]; then
            python -m pip install -v ".[${{ matrix.extras }},test]"
          else
            python -m pip install -v ".[test]"
          fi

      - name: List installed packages
        run: python -m pip list

      - name: Run checksum tests
        run: pytest -v tests/test_checksum32.py

      - uses: codecov/codecov-action@v5
        with:
          fail_ci_if_error: true
          token: ${{ secrets.CODECOV_TOKEN }}
          verbose: true

  test-zarr:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        include:
          - zarr-version: "308"
            zarr-pkg: "zarr==3.0.8"
          - zarr-version: "316"
            zarr-pkg: "zarr==3.1.6"
          - zarr-version: "main"
            zarr-pkg: "zarr @ git+https://github.com/zarr-developers/zarr-python.git@main"

    defaults:
      run:
        shell: bash -el {0}

    steps:
      - name: Checkout source
        uses: actions/checkout@v5
        with:
          submodules: recursive
          fetch-depth: 0 # required for version resolution

      - name: Set up Python
        uses: actions/setup-python@v6
        with:
          python-version: ${{ matrix.python-version }}
          cache: 'pip'

      - name: Install numcodecs and Zarr
        run: |
          python -m pip install -v ".[test,test_extras]" "${{ matrix.zarr-pkg }}" crc32c
      - name: List installed packages
        run: python -m pip list

      - name: Run Zarr integration tests
        run: pytest tests/test_zarr3.py tests/test_zarr3_import.py

      - uses: codecov/codecov-action@v5
        with:
          fail_ci_if_error: true
          token: ${{ secrets.CODECOV_TOKEN }}
          verbose: true