@@ -27,56 +27,27 @@ jobs:
2727 submodules : recursive
2828 fetch-depth : 0 # required for version resolution
2929
30- - name : Set up Conda
31- uses : conda-incubator /setup-miniconda@v3.2.0
30+ - name : Set up Python
31+ uses : actions /setup-python@v6
3232 with :
33- channels : conda-forge
34- miniforge-version : latest
3533 python-version : ${{ matrix.python-version }}
36- activate-environment : test
37- auto-activate-base : false
38-
39- - name : Install build dependencies and compilers
40- run : |
41- conda install -y python numpy cython meson meson-python ninja c-compiler cxx-compiler
42-
43- - name : Install clang
44- if : matrix.platform == 'macos-15-large'
45- run : conda install -y 'clang>=12.0.1,<17'
46-
47- - name : Show conda environment info
48- run : |
49- conda info
50- conda config --show-sources
51- conda list --show-channel-urls
52-
53- - name : Meson args - prefer Conda over system Python (Ubuntu)
54- if : startsWith(matrix.platform, 'ubuntu')
55- run : |
56- echo "MESONPY_PYTHON=$(python -c 'import sys; print(sys.executable)')" >> $GITHUB_ENV
57- PY_INC="$(python -c 'import sysconfig; print(sysconfig.get_path("include"))')"
58- echo "CFLAGS=-I${PY_INC} -I${CONDA_PREFIX}/include ${CFLAGS:-}" >> $GITHUB_ENV
59- echo "CPPFLAGS=-I${PY_INC} -I${CONDA_PREFIX}/include ${CPPFLAGS:-}" >> $GITHUB_ENV
60- echo "LDFLAGS=-L${CONDA_PREFIX}/lib ${LDFLAGS:-}" >> $GITHUB_ENV
34+ cache : ' pip'
6135
6236 - name : Install numcodecs
6337 run : |
6438 # TODO: Remove this conditional when pcodec supports Python 3.14
6539 if [[ "${{ matrix.python-version }}" == "3.14" ]]; then
66- python -m pip install -v \
67- ".[test,test_extras,msgpack,google_crc32c,crc32c,zfpy]" \
68- pytest
40+ python -m pip install -v ".[test,test_extras,msgpack,google_crc32c,crc32c,zfpy]"
6941 else
70- python -m pip install -v \
71- ".[test,test_extras,msgpack,google_crc32c,crc32c,pcodec,zfpy]" \
72- pytest
42+ python -m pip install -v ".[test,test_extras,msgpack,google_crc32c,crc32c,pcodec,zfpy]"
7343 fi
7444
7545 - name : List installed packages
7646 run : python -m pip list
7747
7848 - name : Run tests
79- run : python -m pytest -v
49+ shell : " bash -l {0}"
50+ run : pytest -v
8051
8152 - uses : codecov/codecov-action@v5
8253 with :
@@ -108,26 +79,11 @@ jobs:
10879 submodules : recursive
10980 fetch-depth : 0
11081
111- - name : Set up Conda
112- uses : conda-incubator /setup-miniconda@v3.2.0
82+ - name : Set up Python
83+ uses : actions /setup-python@v6
11384 with :
114- channels : conda-forge
115- miniforge-version : latest
116- python-version : " 3.13"
117- activate-environment : test
118- auto-activate-base : false
119-
120- - name : Install build dependencies and compilers
121- run : |
122- conda install -y python numpy cython meson meson-python ninja c-compiler cxx-compiler
123-
124- - name : Meson args - prefer Conda over system Python (Ubuntu)
125- run : |
126- echo "MESONPY_PYTHON=$(python -c 'import sys; print(sys.executable)')" >> $GITHUB_ENV
127- PY_INC="$(python -c 'import sysconfig; print(sysconfig.get_path("include"))')"
128- echo "CFLAGS=-I${PY_INC} -I${CONDA_PREFIX}/include ${CFLAGS:-}" >> $GITHUB_ENV
129- echo "CPPFLAGS=-I${PY_INC} -I${CONDA_PREFIX}/include ${CPPFLAGS:-}" >> $GITHUB_ENV
130- echo "LDFLAGS=-L${CONDA_PREFIX}/lib ${LDFLAGS:-}" >> $GITHUB_ENV
85+ python-version : ${{ matrix.python-version }}
86+ cache : ' pip'
13187
13288 - name : Install numcodecs
13389 run : |
14197 run : python -m pip list
14298
14399 - name : Run checksum tests
144- run : python -m pytest -v tests/test_checksum32.py
100+ run : pytest -v tests/test_checksum32.py
145101
146102 - uses : codecov/codecov-action@v5
147103 with :
@@ -173,35 +129,20 @@ jobs:
173129 submodules : recursive
174130 fetch-depth : 0 # required for version resolution
175131
176- - name : Set up Conda
177- uses : conda-incubator /setup-miniconda@v3.2.0
132+ - name : Set up Python
133+ uses : actions /setup-python@v6
178134 with :
179- channels : conda-forge
180- miniforge-version : latest
181- python-version : " 3.13"
182- activate-environment : test
183- auto-activate-base : false
184-
185- - name : Install build dependencies and compilers
186- run : |
187- conda install -y python numpy cython meson meson-python ninja c-compiler cxx-compiler
188-
189- - name : Meson args - prefer Conda over system Python (Ubuntu)
190- run : |
191- echo "MESONPY_PYTHON=$(python -c 'import sys; print(sys.executable)')" >> $GITHUB_ENV
192- PY_INC="$(python -c 'import sysconfig; print(sysconfig.get_path("include"))')"
193- echo "CFLAGS=-I${PY_INC} -I${CONDA_PREFIX}/include ${CFLAGS:-}" >> $GITHUB_ENV
194- echo "CPPFLAGS=-I${PY_INC} -I${CONDA_PREFIX}/include ${CPPFLAGS:-}" >> $GITHUB_ENV
195- echo "LDFLAGS=-L${CONDA_PREFIX}/lib ${LDFLAGS:-}" >> $GITHUB_ENV
135+ python-version : ${{ matrix.python-version }}
136+ cache : ' pip'
196137
197138 - name : Install numcodecs and Zarr
198139 run : |
199- python -m pip install -v ".[test,test_extras]" "${{ matrix.zarr-pkg }}" crc32c
140+ python -m pip install -v ".[test,test_extras]" "${{ matrix.zarr-pkg }}" crc32c
200141 - name : List installed packages
201142 run : python -m pip list
202143
203144 - name : Run Zarr integration tests
204- run : python -m pytest tests/test_zarr3.py tests/test_zarr3_import.py
145+ run : pytest tests/test_zarr3.py tests/test_zarr3_import.py
205146
206147 - uses : codecov/codecov-action@v5
207148 with :
0 commit comments