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Use Conda Python headers #839

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DimitriPapadopoulos wants to merge 4 commits intozarr-developers:mainfrom
DimitriPapadopoulos:fix-cython
Draft

Use Conda Python headers #839
DimitriPapadopoulos wants to merge 4 commits intozarr-developers:mainfrom
DimitriPapadopoulos:fix-cython

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@DimitriPapadopoulos DimitriPapadopoulos commented Apr 18, 2026

Fix CI failure. Convince Meson to pick Python headers installed by Conda, not system-wide headers.

TODO:

  • Unit tests and/or doctests in docstrings
  • Tests pass locally
  • Docstrings and API docs for any new/modified user-facing classes and functions
  • Changes documented in docs/release.rst
  • Docs build locally
  • GitHub Actions CI passes
  • Test coverage to 100% (Codecov passes)

@DimitriPapadopoulos DimitriPapadopoulos changed the title Install Python headers alongside compiler Install Python headers Apr 18, 2026
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codecov bot commented Apr 18, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 98.22%. Comparing base (1fdde70) to head (17c63a0).

Additional details and impacted files
@@             Coverage Diff             @@
##              main     #839      +/-   ##
===========================================
- Coverage   100.00%   98.22%   -1.78%     
===========================================
  Files           27       27              
  Lines          901      901              
===========================================
- Hits           901      885      -16     
- Misses           0       16      +16     

see 2 files with indirect coverage changes

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@DimitriPapadopoulos DimitriPapadopoulos force-pushed the fix-cython branch 4 times, most recently from 2260335 to 64ebfea Compare April 18, 2026 15:25
@DimitriPapadopoulos DimitriPapadopoulos changed the title Install Python headers Use Conda Python headers Apr 18, 2026
@DimitriPapadopoulos DimitriPapadopoulos force-pushed the fix-cython branch 6 times, most recently from 835c40a to 7bab921 Compare April 19, 2026 11:58
@DimitriPapadopoulos DimitriPapadopoulos force-pushed the fix-cython branch 4 times, most recently from d50034a to ed7813f Compare April 19, 2026 12:33
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